Factsheet for TraesCS3B01G137000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G119500.1	Wheat	cytosol	92.61	91.32
TraesCS3A01G117700.1	Wheat	cytosol	86.36	86.12
Zm00001d039597_P001	Maize	cytosol	52.56	52.11
Zm00001d008782_P001	Maize	nucleus	50.28	50.14
HORVU3Hr1G021650.1	Barley	nucleus	59.09	47.27
TraesCS1B01G139200.1	Wheat	plastid	33.81	32.51
GSMUA_AchrUn_...	Banana	nucleus	30.68	30.86
GSMUA_Achr7P13270_001	Banana	nucleus	31.82	30.68
Bra000551.1-P	Field mustard	cytosol, mitochondrion	21.59	29.8
CDX97112	Canola	nucleus, plastid	21.88	28.1
Bra023326.1-P	Field mustard	plastid	18.18	28.07
Bra008960.1-P	Field mustard	nucleus, plastid	21.88	28.0
CDY38508	Canola	cytosol	24.43	27.65
CDX83224	Canola	cytosol	25.28	27.3
CDX69754	Canola	nucleus, plastid	21.31	27.27
TraesCS3B01G243000.2	Wheat	nucleus	24.15	26.98
KRH52543	Soybean	nucleus	31.82	26.54
Bra007780.1-P	Field mustard	nucleus	22.16	26.35
CDX76742	Canola	nucleus	22.44	26.33
CDY11512	Canola	nucleus	22.16	26.0
AT2G25690.1	Thale cress	cytosol	23.86	25.93
VIT_04s0008g04490.t01	Wine grape	nucleus	30.11	25.79
CDX85711	Canola	plastid	16.48	25.66
TraesCS3B01G323700.2	Wheat	cytosol	19.32	25.19
TraesCS4B01G018400.1	Wheat	plastid	21.59	25.0
KRH16080	Soybean	nucleus	28.41	24.63
KRH05019	Soybean	nucleus	27.84	24.56
PGSC0003DMT400037607	Potato	nucleus	26.14	23.41
Solyc08g067970.2.1	Tomato	nucleus	26.99	23.4
KRH61879	Soybean	extracellular	28.98	23.02
KRH23481	Soybean	plastid	25.85	22.86
AT5G11460.1	Thale cress	cytosol, plastid	22.16	22.67
KRH09840	Soybean	plastid	25.0	22.17

Protein Annotations

EnsemblPlants:TraesCS3B01G137000.1	EnsemblPlantsGene:TraesCS3B01G137000	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF12
PFAM:PF04570	PFscan:PS51795	SEG:seg	MapMan:27.3.3	:	:

Description

No Description!

Coordinates

chr3B:-:120403059..120405436

Molecular Weight (calculated)

36341.0 Da

IEP (calculated)

7.125

GRAVY (calculated)

-0.293

Length

352 amino acids

Sequence
(BLAST)

001: MLRRMVSDQG PGSGGSGGDA RPRGGGTLFA VPRLFIGLAA AKRAPDGAGE SERSPTSPLD PKALLLRSPR SPRTWDAEPV GLGLVVDVAL AAGADGSAAK
101: TCVLSPRLRL RTHGCAGSTT KGCGGGGHSQ PELGGKTISC PASATAGMSV PCSRFFHGDL KSGPEAARPD GAHSGAKRHC FHLGELPGPG SLPASIAGGP
201: RRFVGSVSAS EVEQSEDYTC IIARGPNPKT THIFGDCILE PQTTVGKSDE AAMEPKDGAS AKSYLVVKRA TESAAGPGED FLSSCFTCRK KLEGNDIYIY
301: RGEKAFCSAE CRDQEIMIEE EAENSMAIGG SPRSSCSSLH EDIFMAGMMV AT

Best Arabidopsis Sequence Match ( AT5G11460.1 )
(BLAST)

001: MSQHSNYQMT TASDYYSTKP VLSAIRSHKL ISSVFEGKCP SDYESAWSPT SPLDFRLFST LGNPFAASSS RSIWRGKQRS WDSGKVGLSI VHSLVDDHHT
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG

Arabidopsis Description

At5g11460 [Source:UniProtKB/TrEMBL;Acc:Q9LYE4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.