Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g067970.2.1 | Tomato | nucleus | 93.89 | 90.89 |
| VIT_04s0008g04490.t01 | Wine grape | nucleus | 49.62 | 47.45 |
| CDX69754 | Canola | nucleus, plastid | 26.97 | 38.55 |
| Bra008960.1-P | Field mustard | nucleus, plastid | 25.7 | 36.73 |
| KRH05019 | Soybean | nucleus | 36.9 | 36.34 |
| Os01t0180400-01 | Rice | cytosol | 17.3 | 36.17 |
| CDX97112 | Canola | nucleus, plastid | 24.94 | 35.77 |
| GSMUA_Achr7P13270_001 | Banana | nucleus | 32.57 | 35.07 |
| KRH61879 | Soybean | extracellular | 39.44 | 34.99 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.79 | 34.57 |
| PGSC0003DMT400082082 | Potato | nucleus, plastid | 26.46 | 34.44 |
| CDX85711 | Canola | plastid | 19.59 | 34.07 |
| Bra000551.1-P | Field mustard | cytosol, mitochondrion | 21.88 | 33.73 |
| CDY38508 | Canola | cytosol | 26.46 | 33.44 |
| CDY11512 | Canola | nucleus | 25.45 | 33.33 |
| CDX76742 | Canola | nucleus | 25.19 | 33.0 |
| CDX83224 | Canola | cytosol | 26.97 | 32.52 |
| Bra007780.1-P | Field mustard | nucleus | 24.43 | 32.43 |
| Os01t0593200-01 | Rice | nucleus | 21.37 | 32.31 |
| HORVU3Hr1G051540.1 | Barley | cytosol | 22.39 | 32.23 |
| KRH52543 | Soybean | nucleus | 34.35 | 31.99 |
| TraesCS3D01G215200.1 | Wheat | nucleus | 22.14 | 31.87 |
| AT2G25690.1 | Thale cress | cytosol | 26.21 | 31.79 |
| EES00998 | Sorghum | cytosol, plastid | 21.63 | 31.37 |
| TraesCS3A01G212800.1 | Wheat | nucleus | 21.37 | 30.88 |
| Bra023326.1-P | Field mustard | plastid | 17.81 | 30.7 |
| KRH16080 | Soybean | nucleus | 31.55 | 30.54 |
| Os01t0719000-01 | Rice | cytosol | 19.34 | 29.01 |
| AT5G11460.1 | Thale cress | cytosol, plastid | 24.94 | 28.49 |
| TraesCS3B01G243000.2 | Wheat | nucleus | 22.65 | 28.25 |
| Zm00001d044365_P001 | Maize | cytosol | 18.83 | 28.03 |
| GSMUA_Achr7P09810_001 | Banana | mitochondrion | 29.52 | 27.95 |
| Os05t0180500-01 | Rice | cytosol | 22.9 | 27.52 |
| Zm00001d039597_P001 | Maize | cytosol | 24.68 | 27.32 |
| Zm00001d008782_P001 | Maize | nucleus | 24.43 | 27.2 |
| EES00181 | Sorghum | cytosol, extracellular, nucleus | 19.59 | 27.11 |
| TraesCS3B01G137000.1 | Wheat | cytosol | 23.41 | 26.14 |
| TraesCS3B01G323700.2 | Wheat | cytosol | 17.81 | 25.93 |
| EES01375 | Sorghum | plastid | 17.3 | 25.86 |
| TraesCS3D01G119500.1 | Wheat | cytosol | 23.41 | 25.77 |
| TraesCS1B01G139200.1 | Wheat | plastid | 23.92 | 25.68 |
| TraesCS3D01G288800.1 | Wheat | cytosol | 17.05 | 24.91 |
| TraesCS1D01G120700.1 | Wheat | cytosol, extracellular, plastid | 24.94 | 24.81 |
| OQU77551 | Sorghum | mitochondrion, plastid | 23.41 | 24.8 |
| TraesCS3A01G117700.1 | Wheat | cytosol | 22.14 | 24.65 |
| HORVU3Hr1G068120.1 | Barley | cytosol | 16.29 | 24.62 |
| TraesCS3A01G289000.1 | Wheat | cytosol | 16.79 | 24.35 |
| Zm00001d043612_P002 | Maize | plastid | 15.01 | 23.23 |
| Zm00001d037713_P001 | Maize | cytosol | 18.83 | 22.56 |
| TraesCS1A01G119800.1 | Wheat | plastid | 21.63 | 21.52 |
| HORVU1Hr1G026780.1 | Barley | cytosol, extracellular, plastid | 19.59 | 21.45 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 18.07 | 21.32 |
| PGSC0003DMT400037957 | Potato | plastid | 13.23 | 17.75 |
| HORVU3Hr1G021650.1 | Barley | nucleus | 18.07 | 16.14 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400037607 | EnsemblPlantsGene:PGSC0003DMG400014504 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF15 |
| PFAM:PF04570 | PFscan:PS51795 | PGSC:PGSC0003DMG400014504 | SEG:seg | UniParc:UPI0002956BDB | UniProt:M1B5L8 |
| MapMan:27.3.3 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400014504]
Coordinates
chr8:-:42681686..42684225
Molecular Weight (calculated)
42832.2 Da
IEP (calculated)
6.950
GRAVY (calculated)
-0.391
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHLMSDGIS DSYFQSDVLV RKHKSNSFFN VPGVFVGLNP KGSESDSVRS PTSPLDFRVF SNLGNPFRSS TSEGAGANKT WGCTKVGLGI VDSLDDEMKQ
101: SGKVFRSSDS KNILFGTQMR IKTHDFQSCV DDSLEEPKSL PKNISIFPHT LSKSSNLRKG SSDVVFGIGD ALSEHELSRN FRSCSLDSGR SSSRFASLAN
201: RTVAFGSENA INPVVSHTKC VRGCSKLGNP AGGAKLSPIP TPVGSNTSLV GSISASDIEL SEDYTCVRTR GPNAKVTHIF CDCILECHNN ELPNFCKNAN
301: EKTVLPEVTD SSEVLTSFPS SDFLRFCSSC KKRLDGKDIY MYRGEKAFCS LDCRSEAILI DEEMEKKVNN HSESTIKPNS RDEVFDTGLF IVT
101: SGKVFRSSDS KNILFGTQMR IKTHDFQSCV DDSLEEPKSL PKNISIFPHT LSKSSNLRKG SSDVVFGIGD ALSEHELSRN FRSCSLDSGR SSSRFASLAN
201: RTVAFGSENA INPVVSHTKC VRGCSKLGNP AGGAKLSPIP TPVGSNTSLV GSISASDIEL SEDYTCVRTR GPNAKVTHIF CDCILECHNN ELPNFCKNAN
301: EKTVLPEVTD SSEVLTSFPS SDFLRFCSSC KKRLDGKDIY MYRGEKAFCS LDCRSEAILI DEEMEKKVNN HSESTIKPNS RDEVFDTGLF IVT
001: MSQHSNYQMT TASDYYSTKP VLSAIRSHKL ISSVFEGKCP SDYESAWSPT SPLDFRLFST LGNPFAASSS RSIWRGKQRS WDSGKVGLSI VHSLVDDHHT
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG
Arabidopsis Description
At5g11460 [Source:UniProtKB/TrEMBL;Acc:Q9LYE4]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.