Factsheet for Zm00001d044365_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00998	Sorghum	cytosol, plastid	80.68	78.6
Os01t0593200-01	Rice	nucleus	62.88	63.85
TraesCS3D01G215200.1	Wheat	nucleus	62.88	60.81
HORVU3Hr1G051540.1	Barley	cytosol	61.74	59.71
TraesCS3A01G212800.1	Wheat	nucleus	61.36	59.56
TraesCS3B01G243000.2	Wheat	nucleus	66.29	55.56
Zm00001d043612_P002	Maize	plastid	25.0	25.98
Bra008960.1-P	Field mustard	nucleus, plastid	26.89	25.82
Bra007780.1-P	Field mustard	nucleus	28.03	25.0
CDX97112	Canola	nucleus, plastid	25.76	24.82
CDX69754	Canola	nucleus, plastid	25.76	24.73
Bra000551.1-P	Field mustard	cytosol, mitochondrion	23.86	24.71
CDY11512	Canola	nucleus	27.65	24.33
CDX76742	Canola	nucleus	26.89	23.67
Bra023326.1-P	Field mustard	plastid	20.08	23.25
AT5G11460.1	Thale cress	cytosol, plastid	29.92	22.97
CDX85711	Canola	plastid	19.32	22.57
AT2G25690.1	Thale cress	cytosol	27.27	22.22
CDY38508	Canola	cytosol	26.14	22.19
CDX83224	Canola	cytosol	26.14	21.17
Zm00001d032937_P001	Maize	cytosol	22.35	20.92
KRH52543	Soybean	nucleus	33.33	20.85
Zm00001d008782_P001	Maize	nucleus	27.65	20.68
Zm00001d039597_P001	Maize	cytosol	27.65	20.56
Zm00001d013595_P001	Maize	mitochondrion	24.62	20.19
VIT_04s0008g04490.t01	Wine grape	nucleus	31.06	19.95
Solyc08g067970.2.1	Tomato	nucleus	29.55	19.21
KRH23481	Soybean	plastid	28.41	18.84
PGSC0003DMT400037607	Potato	nucleus	28.03	18.83
KRH16080	Soybean	nucleus	28.79	18.72
KRH05019	Soybean	nucleus	27.65	18.3
Zm00001d037713_P001	Maize	cytosol	22.73	18.29
KRH61879	Soybean	extracellular	29.92	17.83
KRH09840	Soybean	plastid	25.76	17.13
GSMUA_Achr7P09810_001	Banana	mitochondrion	25.0	15.9
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	19.32	15.32

Protein Annotations

EMBL:EU957068	EMBL:EU968071	EnsemblPlants:Zm00001d044365_P001	EnsemblPlants:Zm00001d044365_T001	EnsemblPlantsGene:Zm00001d044365	EntrezGene:100281547
InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF18	PFAM:PF04570	PFscan:PS51795
ProteinID:ONM40987.1	ProteinID:ONM40988.1	SEG:seg	UniParc:UPI000182C17C	UniProt:B6SWF3	MapMan:27.3.3

Description

MARD1

Coordinates

chr3:+:226293999..226296387

Molecular Weight (calculated)

29009.2 Da

IEP (calculated)

4.377

GRAVY (calculated)

-0.395

Length

264 amino acids

Sequence
(BLAST)

001: MATDSSALQA SSESIAQKMG FFRVPDLLVK LSAKCLSDLD VVRSPTSPLD LKFFTGLGNK SPGDASQNQK ILLGDRVGLG LVDSLTDDNP APLGGRKVLF
101: LGSEMRIIDN LSRKNSSTAP DQAGEVEQKD DNMSDGLMGS AMSLGDIINS EDYTRVVSRG PNPRTTHFFG DRVFELQAEQ LMPVESKVDQ STSPVEDGLM
201: SFCYFCSEKL KEAEDIYIYQ GDKSFCSVEC RENFMVDYEM EEAYHPASPR SPPSDGGRIF QLIR

Best Arabidopsis Sequence Match ( AT5G11460.1 )
(BLAST)

001: MSQHSNYQMT TASDYYSTKP VLSAIRSHKL ISSVFEGKCP SDYESAWSPT SPLDFRLFST LGNPFAASSS RSIWRGKQRS WDSGKVGLSI VHSLVDDHHT
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG

Arabidopsis Description

At5g11460 [Source:UniProtKB/TrEMBL;Acc:Q9LYE4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.