Factsheet for TraesCS3A01G212800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
plastid 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G215200.1	Wheat	nucleus	97.43	97.07
HORVU3Hr1G051540.1	Barley	cytosol	94.49	94.14
TraesCS3B01G243000.2	Wheat	nucleus	83.09	71.75
Os01t0593200-01	Rice	nucleus	63.6	66.54
EES00998	Sorghum	cytosol, plastid	66.18	66.42
Zm00001d044365_P001	Maize	cytosol	59.56	61.36
Bra000551.1-P	Field mustard	cytosol, mitochondrion	25.0	26.67
Bra008960.1-P	Field mustard	nucleus, plastid	26.1	25.82
CDX69754	Canola	nucleus, plastid	25.74	25.45
Bra007780.1-P	Field mustard	nucleus	26.84	24.66
CDX97112	Canola	nucleus, plastid	24.63	24.45
TraesCS3A01G289000.1	Wheat	cytosol	23.53	23.62
CDY38508	Canola	cytosol	26.47	23.15
CDX76742	Canola	nucleus	25.37	23.0
CDY11512	Canola	nucleus	25.0	22.67
CDX85711	Canola	plastid	18.38	22.12
TraesCS3A01G117700.1	Wheat	cytosol	28.68	22.1
TraesCS4A01G295300.1	Wheat	plastid	24.26	22.07
CDX83224	Canola	cytosol	26.1	21.78
AT2G25690.1	Thale cress	cytosol	25.74	21.6
PGSC0003DMT400037607	Potato	nucleus	30.88	21.37
Bra023326.1-P	Field mustard	plastid	17.65	21.05
AT5G11460.1	Thale cress	cytosol, plastid	26.47	20.93
KRH52543	Soybean	nucleus	32.35	20.85
Solyc08g067970.2.1	Tomato	nucleus	30.51	20.44
VIT_04s0008g04490.t01	Wine grape	nucleus	29.78	19.71
GSMUA_Achr7P09810_001	Banana	mitochondrion	29.04	19.04
KRH61879	Soybean	extracellular	30.88	18.96
KRH09840	Soybean	plastid	27.57	18.89
KRH23481	Soybean	plastid	27.57	18.84
KRH16080	Soybean	nucleus	27.57	18.47
KRH05019	Soybean	nucleus	26.84	18.3
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	19.12	15.62
TraesCS1A01G119800.1	Wheat	plastid	22.43	15.44

Protein Annotations

EnsemblPlants:TraesCS3A01G212800.1	EnsemblPlantsGene:TraesCS3A01G212800	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF18
PFAM:PF04570	PFscan:PS51795	SEG:seg	MapMan:27.3.3	:	:

Description

No Description!

Coordinates

chr3A:+:384195407..384196343

Molecular Weight (calculated)

29737.0 Da

IEP (calculated)

4.443

GRAVY (calculated)

-0.397

Length

272 amino acids

Sequence
(BLAST)

001: MAAESSVPQT SSESAAHKMG FFRVSDLLVK LSTKCLIELD AVRSPTSPLD LKLFTGLATK SPRSSFLDAG AASQNQKILL GDRVGLGLVD SLSHENNPTP
101: LGSRKVLGSE MRITDNLTLK NSSTAPNQAG LLEQKDENMS DGLNGSIMSL DDIVNSEDYT CVVTRGPNPR TTHIFGDRVF EFQAEQLMPD EGGCEESLAP
201: HLNGDTMSFC CFCGDKLKEG KDIYIYQGDK AFCSMECREN FMEDEMEGEP SIGHSDPSCP SFDNRRIFQL IQ

Best Arabidopsis Sequence Match ( AT2G25690.2 )
(BLAST)

001: MLKTRAMFPH KDQAMSLSLD PQSDLVVGHT NNRPITNPLA LSLLIGLNNK NKCISDSDFV RSPKSPLEFR VLSTMADSFF LRSPRSSLTA HLNCCCGPAA
101: KVGLSIVDSL GDDRCLLPDI VFGPALRIKC SEVMDKHPKL LFPVANKSKK IENERSGVVF EIGDNSSETE PVGLRNRSFS ANDCLRKTRV LSRSKLGQEG
201: DFPGSGSDNA FSSEDDMEDY TCIIAHGPNP KTTHIYGDRV LECHKNELKG DEDNKEKFGS VFPSDNFLGI CNFCNKKLGG GDDIYMYREK SFCSEECRSE
301: EMMIDEEDLE EPCIDMHESL KKLF

Arabidopsis Description

At2g25690 [Source:UniProtKB/TrEMBL;Acc:Q9SL94]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.