Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G288800.1 | Wheat | cytosol | 94.83 | 95.54 |
| TraesCS3B01G323700.2 | Wheat | cytosol | 93.73 | 94.07 |
| HORVU3Hr1G068120.1 | Barley | cytosol | 73.43 | 76.54 |
| Os01t0719000-01 | Rice | cytosol | 52.77 | 54.58 |
| Zm00001d043612_P002 | Maize | plastid | 40.59 | 43.31 |
| EES01375 | Sorghum | plastid | 40.59 | 41.83 |
| CDX85711 | Canola | plastid | 19.93 | 23.89 |
| Bra023326.1-P | Field mustard | plastid | 19.93 | 23.68 |
| TraesCS3A01G212800.1 | Wheat | nucleus | 23.62 | 23.53 |
| Bra007780.1-P | Field mustard | nucleus | 24.72 | 22.64 |
| CDY11512 | Canola | nucleus | 24.35 | 22.0 |
| CDX69754 | Canola | nucleus, plastid | 22.14 | 21.82 |
| CDX76742 | Canola | nucleus | 23.62 | 21.33 |
| CDX97112 | Canola | nucleus, plastid | 21.4 | 21.17 |
| Bra000551.1-P | Field mustard | cytosol, mitochondrion | 19.56 | 20.78 |
| TraesCS4A01G295300.1 | Wheat | plastid | 22.51 | 20.4 |
| Bra008960.1-P | Field mustard | nucleus, plastid | 20.66 | 20.36 |
| CDY38508 | Canola | cytosol | 22.51 | 19.61 |
| AT2G25690.1 | Thale cress | cytosol | 23.25 | 19.44 |
| TraesCS3A01G117700.1 | Wheat | cytosol | 24.35 | 18.7 |
| CDX83224 | Canola | cytosol | 22.14 | 18.4 |
| AT5G11460.1 | Thale cress | cytosol, plastid | 22.88 | 18.02 |
| TraesCS1A01G119800.1 | Wheat | plastid | 26.2 | 17.97 |
| PGSC0003DMT400037607 | Potato | nucleus | 24.35 | 16.79 |
| KRH52543 | Soybean | nucleus | 25.83 | 16.59 |
| VIT_04s0008g04490.t01 | Wine grape | nucleus | 25.09 | 16.55 |
| KRH16080 | Soybean | nucleus | 24.72 | 16.5 |
| Solyc08g067970.2.1 | Tomato | nucleus | 23.99 | 16.01 |
| KRH05019 | Soybean | nucleus | 23.25 | 15.79 |
| GSMUA_Achr7P09810_001 | Banana | mitochondrion | 23.62 | 15.42 |
| KRH23481 | Soybean | plastid | 22.51 | 15.33 |
| KRH09840 | Soybean | plastid | 22.14 | 15.11 |
| KRH61879 | Soybean | extracellular | 24.35 | 14.9 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 15.5 | 12.61 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G289000.1 | EnsemblPlantsGene:TraesCS3A01G289000 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF13 |
| PFAM:PF04570 | PFscan:PS51795 | SEG:seg | MapMan:27.3.3 | : | : |
Description
No Description!
Coordinates
chr3A:-:517094974..517097185
Molecular Weight (calculated)
29232.7 Da
IEP (calculated)
4.545
GRAVY (calculated)
-0.231
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNCADQSLA QRSIGFFRVP GLFVRLSSKG LNAVDPDSVW SPTSPLDFKN LPSSNTLGTN LKPTGLLGIE ADLLKLRTGS PRVGLGLVDA LTADEGSLHF
101: GGKNSFLESI KPFLELGLPK VAADDASSCQ KTGSVGLGAA MKENTGFVQC DCEDEEYTCV IEHGPNPRTT HILKGQTVEV PNGVRSKRPI FTIEPIEEPS
201: WPSMPAAGAA ASGSCSHCRK RLREDMDTFM YLGELFCSNE CRKCCMEEEI DEVEVELMVL DSGGSSADLH W
101: GGKNSFLESI KPFLELGLPK VAADDASSCQ KTGSVGLGAA MKENTGFVQC DCEDEEYTCV IEHGPNPRTT HILKGQTVEV PNGVRSKRPI FTIEPIEEPS
201: WPSMPAAGAA ASGSCSHCRK RLREDMDTFM YLGELFCSNE CRKCCMEEEI DEVEVELMVL DSGGSSADLH W
001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK
Arabidopsis Description
NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.