Factsheet for TraesCS3D01G288800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G289000.1	Wheat	cytosol	95.54	94.83
TraesCS3B01G323700.2	Wheat	cytosol	94.42	94.07
HORVU3Hr1G068120.1	Barley	cytosol	74.72	77.31
Os01t0719000-01	Rice	cytosol	53.9	55.34
Zm00001d043612_P002	Maize	plastid	40.89	43.31
EES01375	Sorghum	plastid	42.01	42.97
Bra023326.1-P	Field mustard	plastid	20.45	24.12
CDX85711	Canola	plastid	20.07	23.89
TraesCS3D01G215200.1	Wheat	nucleus	24.16	23.81
CDX69754	Canola	nucleus, plastid	22.68	22.18
Bra007780.1-P	Field mustard	nucleus	24.16	21.96
CDY11512	Canola	nucleus	24.16	21.67
CDX97112	Canola	nucleus, plastid	21.56	21.17
TraesCS4D01G016600.1	Wheat	mitochondrion	21.93	21.07
CDX76742	Canola	nucleus	23.42	21.0
Bra000551.1-P	Field mustard	cytosol, mitochondrion	19.7	20.78
Bra008960.1-P	Field mustard	nucleus, plastid	21.19	20.73
CDY38508	Canola	cytosol	22.68	19.61
AT2G25690.1	Thale cress	cytosol	23.05	19.14
TraesCS3D01G119500.1	Wheat	cytosol	25.28	19.05
CDX83224	Canola	cytosol	22.3	18.4
TraesCS1D01G120700.1	Wheat	cytosol, extracellular, plastid	26.77	18.23
AT5G11460.1	Thale cress	cytosol, plastid	22.3	17.44
PGSC0003DMT400037607	Potato	nucleus	24.91	17.05
VIT_04s0008g04490.t01	Wine grape	nucleus	26.02	17.03
KRH52543	Soybean	nucleus	26.39	16.82
Solyc08g067970.2.1	Tomato	nucleus	24.16	16.01
KRH16080	Soybean	nucleus	24.16	16.01
GSMUA_Achr7P09810_001	Banana	mitochondrion	24.16	15.66
KRH61879	Soybean	extracellular	25.65	15.58
KRH05019	Soybean	nucleus	23.05	15.54
KRH23481	Soybean	plastid	22.68	15.33
KRH09840	Soybean	plastid	21.93	14.86
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	15.61	12.61

Protein Annotations

EnsemblPlants:TraesCS3D01G288800.1	EnsemblPlantsGene:TraesCS3D01G288800	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF13
PFAM:PF04570	PFscan:PS51795	SEG:seg	MapMan:27.3.3	:	:

Description

No Description!

Coordinates

chr3D:-:397798423..397800579

Molecular Weight (calculated)

28895.3 Da

IEP (calculated)

4.912

GRAVY (calculated)

-0.222

Length

269 amino acids

Sequence
(BLAST)

001: MDNCADQSLG QRSIGFFRVP GLFVRLSSKG LNAVDPDSVW SPTSPLDFKN LPSSNTVGTN LKPTGLLGIE ADLLKLRTGS PRVGLGLVDA LTADEGSLHF
101: GGKNSFLESI KPFLELGLPK AAADASSCQK TGSAGLGAAM KENTGFVHCD CEDEEYTCVI EHGPNPRTTH ILKGHTVEVP NGVRSKRPIF TIEPIEEQSW
201: PSMPAAGAAS GSCSHCRKRL REDMDTFMYL GEAFCSNECR KCCIEEEIDE VVVELMMLDS GGSSAGLHW

Best Arabidopsis Sequence Match ( AT3G22550.1 )
(BLAST)

001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK

Arabidopsis Description

NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.