Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01375 | Sorghum | plastid | 60.24 | 58.17 |
| Os01t0719000-01 | Rice | cytosol | 43.31 | 41.98 |
| TraesCS3D01G288800.1 | Wheat | cytosol | 43.31 | 40.89 |
| HORVU3Hr1G068120.1 | Barley | cytosol | 41.73 | 40.77 |
| TraesCS3A01G289000.1 | Wheat | cytosol | 43.31 | 40.59 |
| TraesCS3B01G323700.2 | Wheat | cytosol | 42.91 | 40.37 |
| Zm00001d044365_P001 | Maize | cytosol | 25.98 | 25.0 |
| Zm00001d013595_P001 | Maize | mitochondrion | 27.17 | 21.43 |
| Bra000551.1-P | Field mustard | cytosol, mitochondrion | 20.87 | 20.78 |
| Bra023326.1-P | Field mustard | plastid | 18.5 | 20.61 |
| CDX69754 | Canola | nucleus, plastid | 21.26 | 19.64 |
| CDX85711 | Canola | plastid | 17.32 | 19.47 |
| Zm00001d039597_P001 | Maize | cytosol | 27.17 | 19.44 |
| Zm00001d008782_P001 | Maize | nucleus | 26.38 | 18.98 |
| Zm00001d032937_P001 | Maize | cytosol | 20.87 | 18.79 |
| Bra008960.1-P | Field mustard | nucleus, plastid | 20.08 | 18.55 |
| CDY38508 | Canola | cytosol | 22.44 | 18.33 |
| Bra007780.1-P | Field mustard | nucleus | 20.87 | 17.91 |
| CDX97112 | Canola | nucleus, plastid | 18.9 | 17.52 |
| CDX83224 | Canola | cytosol | 22.44 | 17.48 |
| CDY11512 | Canola | nucleus | 20.08 | 17.0 |
| CDX76742 | Canola | nucleus | 19.68 | 16.67 |
| AT5G11460.1 | Thale cress | cytosol, plastid | 22.05 | 16.28 |
| AT2G25690.1 | Thale cress | cytosol | 20.47 | 16.05 |
| VIT_04s0008g04490.t01 | Wine grape | nucleus | 25.2 | 15.57 |
| KRH52543 | Soybean | nucleus | 25.59 | 15.4 |
| PGSC0003DMT400037607 | Potato | nucleus | 23.23 | 15.01 |
| KRH61879 | Soybean | extracellular | 25.98 | 14.9 |
| KRH09840 | Soybean | plastid | 23.23 | 14.86 |
| KRH23481 | Soybean | plastid | 22.83 | 14.57 |
| KRH05019 | Soybean | nucleus | 22.83 | 14.54 |
| Zm00001d037713_P001 | Maize | cytosol | 18.5 | 14.33 |
| Solyc08g067970.2.1 | Tomato | nucleus | 22.83 | 14.29 |
| KRH16080 | Soybean | nucleus | 22.83 | 14.29 |
| GSMUA_Achr7P09810_001 | Banana | mitochondrion | 20.08 | 12.29 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 15.75 | 12.01 |
Protein Annotations
| EnsemblPlants:Zm00001d043612_P002 | EnsemblPlants:Zm00001d043612_T002 | EnsemblPlantsGene:Zm00001d043612 | EntrezGene:100274019 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom |
| PANTHER:PTHR33059 | PANTHER:PTHR33059:SF13 | PFAM:PF04570 | PFscan:PS51795 | ProteinID:ONM38576.1 | ProteinID:ONM38577.1 |
| SEG:seg | UniParc:UPI0002208B80 | UniProt:A0A1D6NDL0 | MapMan:27.3.3 | : | : |
Description
Protein MARD1
Coordinates
chr3:+:205153044..205154600
Molecular Weight (calculated)
26664.7 Da
IEP (calculated)
6.130
GRAVY (calculated)
-0.048
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MVESSGHRST VPAAVGFFRV PGLFVRLSGK GGASNAVDPE DSVWSPTSPL DLKHVIRCSP PRACLGLADA LTADGTGSLH SGGRSSFVDS IKPFLERALP
101: KAACGKEAAA AASSSAGVVA ATLGKQASEY ADCEEYTCVI SRGADPRTTH ILAGETVEVR RGDVGGGCRK VVFIIEPLAL SDRQPRASSS SSPAAPARVV
201: ASGRCCCCMK RLLEDRDIFI YLGEKAFCSD ECRNGFIEEA AEEELMILDP ARNL
101: KAACGKEAAA AASSSAGVVA ATLGKQASEY ADCEEYTCVI SRGADPRTTH ILAGETVEVR RGDVGGGCRK VVFIIEPLAL SDRQPRASSS SSPAAPARVV
201: ASGRCCCCMK RLLEDRDIFI YLGEKAFCSD ECRNGFIEEA AEEELMILDP ARNL
001: MSQHSNYQMT TASDYYSTKP VLSAIRSHKL ISSVFEGKCP SDYESAWSPT SPLDFRLFST LGNPFAASSS RSIWRGKQRS WDSGKVGLSI VHSLVDDHHT
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG
Arabidopsis Description
At5g11460 [Source:UniProtKB/TrEMBL;Acc:Q9LYE4]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.