CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000551.1-P	Field mustard	cytosol, mitochondrion	69.77	85.1
CDX83224	Canola	cytosol	75.24	71.78
CDY11512	Canola	nucleus	53.7	55.67
CDX76742	Canola	nucleus	52.09	54.0
AT2G25690.1	Thale cress	cytosol	53.38	51.23
CDX69754	Canola	nucleus, plastid	28.62	32.36
CDX97112	Canola	nucleus, plastid	27.33	31.02
CDX85711	Canola	plastid	22.19	30.53
CDY24316	Canola	mitochondrion, plastid	21.22	30.28
Os01t0180400-01	Rice	cytosol	18.01	29.79
CDX98213	Canola	mitochondrion	24.76	29.39
Os01t0593200-01	Rice	nucleus	24.44	29.23
CDY34246	Canola	mitochondrion	23.79	28.24
CDX92948	Canola	mitochondrion	23.79	28.03
CDY65610	Canola	mitochondrion, nucleus	24.12	27.99
CDY56452	Canola	plastid	20.58	27.12
HORVU3Hr1G051540.1	Barley	cytosol	23.79	27.11
EES00998	Sorghum	cytosol, plastid	23.47	26.94
CDX93919	Canola	nucleus	20.58	26.78
VIT_04s0008g04490.t01	Wine grape	nucleus	35.37	26.76
TraesCS3D01G215200.1	Wheat	nucleus	23.47	26.74
Os01t0719000-01	Rice	cytosol	22.51	26.72
GSMUA_AchrUn_...	Banana	nucleus	29.9	26.57
TraesCS3A01G212800.1	Wheat	nucleus	23.15	26.47
PGSC0003DMT400037607	Potato	nucleus	33.44	26.46
Zm00001d044365_P001	Maize	cytosol	22.19	26.14
Solyc08g067970.2.1	Tomato	nucleus	34.08	26.11
CDX76690	Canola	plastid	19.61	26.07
CDX67936	Canola	nucleus, plastid	20.58	25.1
KRH05019	Soybean	nucleus	31.83	24.81
TraesCS3B01G137000.1	Wheat	cytosol	27.65	24.43
KRH52543	Soybean	nucleus	32.8	24.17
GSMUA_Achr7P13270_001	Banana	nucleus	28.3	24.11
TraesCS3D01G119500.1	Wheat	cytosol	27.65	24.09
TraesCS3A01G117700.1	Wheat	cytosol	27.33	24.08
HORVU3Hr1G068120.1	Barley	cytosol	19.94	23.85
TraesCS3B01G243000.2	Wheat	nucleus	23.79	23.49
TraesCS3B01G323700.2	Wheat	cytosol	19.94	22.96
TraesCS3D01G288800.1	Wheat	cytosol	19.61	22.68
Zm00001d008782_P001	Maize	nucleus	25.72	22.66
Os05t0180500-01	Rice	cytosol	23.79	22.63
TraesCS3A01G289000.1	Wheat	cytosol	19.61	22.51
Zm00001d043612_P002	Maize	plastid	18.33	22.44
KRH16080	Soybean	nucleus	29.26	22.41
KRH61879	Soybean	extracellular	31.83	22.35
CDX79402	Canola	nucleus, plastid	19.94	22.3
EES00181	Sorghum	cytosol, extracellular, nucleus	20.26	22.18
Zm00001d039597_P001	Maize	cytosol	24.76	21.69
EES01375	Sorghum	plastid	18.33	21.67
OQU77551	Sorghum	mitochondrion, plastid	25.08	21.02
HORVU1Hr1G026780.1	Barley	cytosol, extracellular, plastid	22.51	19.5
TraesCS1B01G139200.1	Wheat	plastid	22.83	19.4
Zm00001d037713_P001	Maize	cytosol	20.26	19.21
GSMUA_Achr7P09810_001	Banana	mitochondrion	25.4	19.04
TraesCS1D01G120700.1	Wheat	cytosol, extracellular, plastid	23.47	18.48
TraesCS1A01G119800.1	Wheat	plastid	23.47	18.48
CDY53722	Canola	extracellular, vacuole	21.54	18.31
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	17.68	16.52
HORVU3Hr1G021650.1	Barley	nucleus	22.51	15.91

Protein Annotations

EnsemblPlants:CDY38508	EnsemblPlantsGene:GSBRNA2T00066141001	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF15
PFAM:PF04570	PFscan:PS51795	ProteinID:CDY38508	ProteinID:CDY38508.1	SEG:seg	UniParc:UPI0004EE9DEB
UniProt:A0A078HNX5	MapMan:27.3.3	:	:	:	:

Description

BnaC03g26890DBnaC03g26890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HNX5]

Coordinates

chrLK032425:+:32541..34974

Molecular Weight (calculated)

35108.7 Da

IEP (calculated)

4.893

GRAVY (calculated)

-0.457

Length

311 amino acids

Sequence
(BLAST)

001: MSQSVDPQTD LVGHNNTKAI TNPLTRSLLI GLNNNKCISD SDFLRSPKSP LEFRVLSKMA EPFFLRSPRS SLTAHLNCCC VPDKVGLSIV DSLRDDGVLS
101: PDVVFGPALR LKFSEIKDKH PRLFPETKSL DVEKKRSGVI FEIGDETEPI GLRNRSFSEN DCPRKARVLS QSKVIAEGYF PGIGSDSASS SCLSEDHMEM
201: SEDYTCIIAH GPNPKTTHIY GDRVLECQKN EAINKEKQFE TELESMFPTD HFLSVCDFCN KKLEVGYDIY MYRGEKAFCS EECRSEEMMM IDEEDLEDSC
301: LTMHESLKKL F

Best Arabidopsis Sequence Match ( AT2G25690.2 )
(BLAST)

001: MLKTRAMFPH KDQAMSLSLD PQSDLVVGHT NNRPITNPLA LSLLIGLNNK NKCISDSDFV RSPKSPLEFR VLSTMADSFF LRSPRSSLTA HLNCCCGPAA
101: KVGLSIVDSL GDDRCLLPDI VFGPALRIKC SEVMDKHPKL LFPVANKSKK IENERSGVVF EIGDNSSETE PVGLRNRSFS ANDCLRKTRV LSRSKLGQEG
201: DFPGSGSDNA FSSEDDMEDY TCIIAHGPNP KTTHIYGDRV LECHKNELKG DEDNKEKFGS VFPSDNFLGI CNFCNKKLGG GDDIYMYREK SFCSEECRSE
301: EMMIDEEDLE EPCIDMHESL KKLF

Arabidopsis Description

At2g25690 [Source:UniProtKB/TrEMBL;Acc:Q9SL94]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.