Factsheet for Zm00001d008782_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039597_P001	Maize	cytosol	63.17	62.82
TraesCS3D01G119500.1	Wheat	cytosol	51.56	50.98
TraesCS3B01G137000.1	Wheat	cytosol	50.14	50.28
TraesCS3A01G117700.1	Wheat	cytosol	49.86	49.86
Zm00001d037713_P001	Maize	cytosol	32.01	34.45
GSMUA_Achr7P13270_001	Banana	nucleus	31.44	30.41
Zm00001d013595_P001	Maize	mitochondrion	26.91	29.5
GSMUA_AchrUn_...	Banana	nucleus	28.61	28.86
HORVU3Hr1G021650.1	Barley	nucleus	34.56	27.73
Zm00001d044365_P001	Maize	cytosol	20.68	27.65
Bra000551.1-P	Field mustard	cytosol, mitochondrion	19.83	27.45
Zm00001d032937_P001	Maize	cytosol	21.25	26.6
Zm00001d043612_P002	Maize	plastid	18.98	26.38
CDY11512	Canola	nucleus	22.38	26.33
CDX97112	Canola	nucleus, plastid	20.4	26.28
Bra007780.1-P	Field mustard	nucleus	21.81	26.01
CDX76742	Canola	nucleus	22.1	26.0
Bra023326.1-P	Field mustard	plastid	16.71	25.88
CDX69754	Canola	nucleus, plastid	20.11	25.82
Bra008960.1-P	Field mustard	nucleus, plastid	20.11	25.82
CDY38508	Canola	cytosol	22.66	25.72
KRH05019	Soybean	nucleus	28.61	25.31
CDX83224	Canola	cytosol	23.23	25.15
VIT_04s0008g04490.t01	Wine grape	nucleus	29.18	25.06
Solyc08g067970.2.1	Tomato	nucleus	28.61	24.88
CDX85711	Canola	plastid	15.86	24.78
KRH52543	Soybean	nucleus	29.46	24.64
PGSC0003DMT400037607	Potato	nucleus	27.2	24.43
AT2G25690.1	Thale cress	cytosol	22.1	24.07
KRH61879	Soybean	extracellular	29.75	23.7
KRH16080	Soybean	nucleus	26.91	23.4
KRH23481	Soybean	plastid	24.65	21.86
AT5G11460.1	Thale cress	cytosol, plastid	20.96	21.51
KRH09840	Soybean	plastid	23.23	20.65

Protein Annotations

EnsemblPlants:Zm00001d008782_P001	EnsemblPlants:Zm00001d008782_T001	EnsemblPlantsGene:Zm00001d008782	EntrezGene:100276685	InterPro:IPR007650	InterPro:Zf-FLZ_dom
PANTHER:PTHR33059	PANTHER:PTHR33059:SF12	PFAM:PF04570	PFscan:PS51795	ProteinID:AQK90673.1	SEG:seg
UniParc:UPI000220C534	UniProt:K7VQK7	MapMan:27.3.3	:	:	:

Description

Protein MARD1

Coordinates

chr8:-:19837108..19840416

Molecular Weight (calculated)

36678.5 Da

IEP (calculated)

5.274

GRAVY (calculated)

-0.361

Length

353 amino acids

Sequence
(BLAST)

001: MLRRTVPDRA ADSSGSAGGG DARPRADGSG AALFAVPRLF VGFAAKRAPD AESSRSPTSP LDPKALLLRS PRRAWGAPGL VDALAADTAA ANCLLSPRLR
101: LVRQHSSPPK ECGGGGGGHS QPELGKTMSC PAPDTAAAAA ATAMSVPCSR FQFRRGDLKS GPEEATRSDT GAYLVSNGNA KRNSFDFGKL PGPGSLPVPA
201: SRRFVGSVSA SEIEQSEDYT RVIARGPNPK TTHIFGDCIL EPHTAGASDD EAAAVESEDG AAAGRYFVVK CAAEADGFLS SCFACNKKLD GNDIYIYRGE
301: KAFCSADCRD QEMQLEEEEA ENSTSGASPL SSCSSSSSFH DDDIFMAGMV VAT

Best Arabidopsis Sequence Match ( AT3G63210.1 )
(BLAST)

001: MLRNKPRAAV TTKKQTSLLM ADQPPPPKPN TCHCSPSLFS SPKFRFFTSK MMMTPFDSDF SLVSPTSILE ANPSIFSSKN PKPVSYFEPT IPNPQRFHSP
101: DVFGLADLVK DGDSNRDHSR KPVNKMVLFG SKLRVQIPSS ADFGTKTGIR YPPCQLSPCV QTKVLAVSEI DQTEDYTRVI SHGPNPTITH IFDNSVFVEA
201: TPCSVPLPQP AMETKSTESF LSRCFTCKKN LDQKQDIYIY RGEKGFCSSE CRYQEMLLDQ MET

Arabidopsis Description

MARD1Protein MARD1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGS1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.