CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61879	Soybean	extracellular	61.37	58.47
KRH16080	Soybean	nucleus	43.36	45.07
KRH05019	Soybean	nucleus	41.71	44.11
VIT_04s0008g04490.t01	Wine grape	nucleus	41.94	43.07
Os01t0180400-01	Rice	cytosol	17.06	38.3
Os01t0593200-01	Rice	nucleus	22.99	37.31
CDX69754	Canola	nucleus, plastid	23.93	36.73
Solyc08g067970.2.1	Tomato	nucleus	35.07	36.45
Bra008960.1-P	Field mustard	nucleus, plastid	22.99	35.27
KRH27651	Soybean	plastid	21.09	34.36
PGSC0003DMT400037607	Potato	nucleus	31.99	34.35
EES00998	Sorghum	cytosol, plastid	22.04	34.32
GSMUA_AchrUn_...	Banana	nucleus	28.44	34.29
KRH67235	Soybean	mitochondrion, nucleus	22.99	34.28
KRH32034	Soybean	mitochondrion	21.8	34.07
TraesCS3D01G215200.1	Wheat	nucleus	21.8	33.7
KRG95554	Soybean	mitochondrion, nucleus	22.51	33.57
HORVU3Hr1G051540.1	Barley	cytosol	21.56	33.33
Zm00001d044365_P001	Maize	cytosol	20.85	33.33
Bra000551.1-P	Field mustard	cytosol, mitochondrion	20.14	33.33
CDX97112	Canola	nucleus, plastid	21.56	33.21
KRG91310	Soybean	nucleus, plastid	21.09	33.09
KRH77839	Soybean	plastid	20.38	32.95
CDY38508	Canola	cytosol	24.17	32.8
KRH35505	Soybean	nucleus, plastid	20.62	32.71
CDY11512	Canola	nucleus	23.22	32.67
TraesCS3A01G212800.1	Wheat	nucleus	20.85	32.35
TraesCS3B01G137000.1	Wheat	cytosol	26.54	31.82
GSMUA_Achr7P13270_001	Banana	nucleus	27.49	31.78
TraesCS3D01G119500.1	Wheat	cytosol	26.3	31.09
CDX76742	Canola	nucleus	22.04	31.0
CDX83224	Canola	cytosol	23.93	30.98
Bra007780.1-P	Field mustard	nucleus	21.56	30.74
TraesCS3A01G117700.1	Wheat	cytosol	25.59	30.59
Os01t0719000-01	Rice	cytosol	18.48	29.77
KRH71405	Soybean	mitochondrion, nucleus	18.48	29.66
Zm00001d039597_P001	Maize	cytosol	24.88	29.58
TraesCS3B01G243000.2	Wheat	nucleus	22.04	29.52
Zm00001d008782_P001	Maize	nucleus	24.64	29.46
CDX85711	Canola	plastid	15.64	29.2
AT2G25690.1	Thale cress	cytosol	22.04	28.7
Os05t0180500-01	Rice	cytosol	22.04	28.44
KRH23481	Soybean	plastid	26.54	28.14
EES00181	Sorghum	cytosol, extracellular, nucleus	18.72	27.82
KRH09840	Soybean	plastid	26.07	27.71
Bra023326.1-P	Field mustard	plastid	14.93	27.63
AT5G11460.1	Thale cress	cytosol, plastid	22.04	27.03
TraesCS1B01G139200.1	Wheat	plastid	23.22	26.78
GSMUA_Achr7P09810_001	Banana	mitochondrion	26.3	26.75
TraesCS3B01G323700.2	Wheat	cytosol	17.06	26.67
TraesCS3D01G288800.1	Wheat	cytosol	16.82	26.39
TraesCS1D01G120700.1	Wheat	cytosol, extracellular, plastid	24.64	26.33
TraesCS3A01G289000.1	Wheat	cytosol	16.59	25.83
Zm00001d043612_P002	Maize	plastid	15.4	25.59
EES01375	Sorghum	plastid	15.88	25.48
HORVU3Hr1G068120.1	Barley	cytosol	15.64	25.38
OQU77551	Sorghum	mitochondrion, plastid	22.27	25.34
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	19.67	24.92
Zm00001d037713_P001	Maize	cytosol	18.96	24.39
HORVU1Hr1G026780.1	Barley	cytosol, extracellular, plastid	19.43	22.84
TraesCS1A01G119800.1	Wheat	plastid	21.33	22.78
HORVU3Hr1G021650.1	Barley	nucleus	19.91	19.09

Protein Annotations

EMBL:ACUP02003423	EnsemblPlants:KRH52543	EnsemblPlantsGene:GLYMA_06G074400	EntrezGene:100812576	InterPro:IPR007650	InterPro:Zf-FLZ_dom
PANTHER:PTHR33059	PANTHER:PTHR33059:SF15	PFAM:PF04570	PFscan:PS51795	ProteinID:KRH52542.1	ProteinID:KRH52543
ProteinID:KRH52543.1	ProteinID:KRH52544.1	UniParc:UPI00023C3D31	UniProt:I1K917	MapMan:27.3.3	:

Description

hypothetical protein

Coordinates

chr6:-:5733299..5735942

Molecular Weight (calculated)

46448.8 Da

IEP (calculated)

7.199

GRAVY (calculated)

-0.558

Length

422 amino acids

Sequence
(BLAST)

001: MLRKRNRSVQ KDQHLMCEVN SEHYSQSHHA LGRNNIKGHS IFNVPCLFVG LGPKGLLDSD SVRSPTSPLD DARVLSNLGK NPVRKPRSSH HERSWDCCKV
101: GLGIVESLED CSSSRFSGKI LQSPESKRVS LSPQMMMIKA PNCQIHRDSS LEGSKSLPKD FCKAPPYYAH QNGSVVIHKG ECESESTVLF EIGESGLELE
201: PFGRTRSCSL DSCSPLKALS GVTTFYSNSD TDNNFAVKDV SSPPRFIGGS QNSNNNFTPT KLNSTTLSIS PSNDIIKSLS ASEIELSEDY TCVISHGPNP
301: KTTHIFGDCI LETHSNAFKT HFKNEEKEHG VKPLGSNKLG SPKPYPSSDF LSFCHHCNKK LEEGKDIYIY GGEKAFCSLT CRAMEIMIDE ELEKSNTNPP
401: CESSPKPKLG ELLFETGILT AT

Best Arabidopsis Sequence Match ( AT2G25690.2 )
(BLAST)

001: MLKTRAMFPH KDQAMSLSLD PQSDLVVGHT NNRPITNPLA LSLLIGLNNK NKCISDSDFV RSPKSPLEFR VLSTMADSFF LRSPRSSLTA HLNCCCGPAA
101: KVGLSIVDSL GDDRCLLPDI VFGPALRIKC SEVMDKHPKL LFPVANKSKK IENERSGVVF EIGDNSSETE PVGLRNRSFS ANDCLRKTRV LSRSKLGQEG
201: DFPGSGSDNA FSSEDDMEDY TCIIAHGPNP KTTHIYGDRV LECHKNELKG DEDNKEKFGS VFPSDNFLGI CNFCNKKLGG GDDIYMYREK SFCSEECRSE
301: EMMIDEEDLE EPCIDMHESL KKLF

Arabidopsis Description

At2g25690 [Source:UniProtKB/TrEMBL;Acc:Q9SL94]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.