CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35505	Soybean	nucleus, plastid	89.22	90.23
KRH27651	Soybean	plastid	52.79	54.83
KRH77839	Soybean	plastid	50.56	52.11
VIT_05s0020g03670.t01	Wine grape	nucleus, plastid	51.67	47.6
Solyc09g082210.2.1	Tomato	cytosol, plastid	50.56	46.26
PGSC0003DMT400082082	Potato	nucleus, plastid	50.93	45.36
GSMUA_Achr3P25470_001	Banana	mitochondrion	37.92	43.22
KRG95554	Soybean	mitochondrion, nucleus	39.03	37.1
GSMUA_Achr1P14130_001	Banana	mitochondrion	39.41	37.06
KRH32034	Soybean	mitochondrion	36.06	35.93
KRH67235	Soybean	mitochondrion, nucleus	36.8	34.98
GSMUA_Achr9P25720_001	Banana	nucleus	42.01	34.45
GSMUA_Achr8P20380_001	Banana	mitochondrion, nucleus	36.06	34.4
KRH71405	Soybean	mitochondrion, nucleus	32.71	33.46
GSMUA_Achr2P08850_001	Banana	plastid	36.43	32.89
Os03t0665200-01	Rice	nucleus	36.8	32.78
TraesCS4D01G016600.1	Wheat	mitochondrion	31.97	30.71
EER91113	Sorghum	mitochondrion	35.32	30.25
Zm00001d013595_P001	Maize	mitochondrion	35.32	29.5
GSMUA_Achr6P22030_001	Banana	cytosol	32.71	29.14
Zm00001d032937_P001	Maize	cytosol	30.48	29.08
TraesCS4A01G295300.1	Wheat	plastid	31.6	28.43
TraesCS4B01G018400.1	Wheat	plastid	30.48	26.97
GSMUA_Achr4P22610_001	Banana	nucleus	36.8	26.33
EER94230	Sorghum	cytosol, endoplasmic reticulum, nucleus	27.14	25.98
CDX67936	Canola	nucleus, plastid	23.79	25.1
GSMUA_Achr4P21250_001	Banana	nucleus	34.2	25.07
AT1G79970.1	Thale cress	nucleus, plastid	21.56	24.17
CDX79402	Canola	nucleus, plastid	24.91	24.1
Os10t0422600-01	Rice	endoplasmic reticulum	30.86	24.06
KRH05019	Soybean	nucleus	33.09	22.31
Bra003541.1-P	Field mustard	nucleus, plastid	23.05	22.3
KRH23481	Soybean	plastid	31.97	21.61
KRH52543	Soybean	nucleus	33.09	21.09
KRH09840	Soybean	plastid	30.48	20.65
KRH16080	Soybean	nucleus	30.86	20.44
KRH61879	Soybean	extracellular	32.71	19.86
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	26.02	16.02
HORVU3Hr1G018540.1	Barley	extracellular	5.2	10.77

Protein Annotations

EMBL:ACUP02012676	EnsemblPlants:KRG91310	EnsemblPlantsGene:GLYMA_20G146900	EntrezGene:100807906	InterPro:IPR007650	InterPro:Zf-FLZ_dom
PANTHER:PTHR33059	PANTHER:PTHR33059:SF26	PFAM:PF04570	PFscan:PS51795	ProteinID:KRG91310	ProteinID:KRG91310.1
SEG:seg	UniParc:UPI000233DDBA	UniProt:I1NGF9	MapMan:27.3.3	:	:

Description

hypothetical protein

Coordinates

chr20:+:38539964..38543194

Molecular Weight (calculated)

30018.1 Da

IEP (calculated)

6.250

GRAVY (calculated)

-0.579

Length

269 amino acids

Sequence
(BLAST)

001: MADSEKYNKK PSSSSFFSSP RLFTNFTPKG FHETETMMSP TSTLDSKPFS GFKNPFWSET NSPRTPVSEH KRYWDKLDSK GIGLGLVDAL VDEEKHGEVS
101: SKSESRMVVF GSQLKIQIPP LSPSESSKFV AEKGNSSSGV ADANSQRVFM GCLSASEMEL SEDYTRVISR GPNPRTTHIF DNCIIESSCF ELGCSASSVK
201: ENGCFLDQTS YHSRSFLSVC FHCKKNLGQG KDIYMYRGER AFCSNECRYQ GMLLEEEMSK LEASDIYGP

Best Arabidopsis Sequence Match ( AT3G22550.1 )
(BLAST)

001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK

Arabidopsis Description

NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.