Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G016600.1 | Wheat | mitochondrion | 38.44 | 60.0 |
| TraesCS4A01G295300.1 | Wheat | plastid | 39.13 | 57.19 |
| Os03t0665200-01 | Rice | nucleus | 38.67 | 55.96 |
| TraesCS4B01G018400.1 | Wheat | plastid | 38.9 | 55.92 |
| EER91113 | Sorghum | mitochondrion | 38.67 | 53.82 |
| Zm00001d013595_P001 | Maize | mitochondrion | 37.07 | 50.31 |
| HORVU3Hr1G018540.1 | Barley | extracellular | 8.92 | 30.0 |
| Solyc09g065390.1.1 | Tomato | mitochondrion | 11.67 | 27.72 |
| CDX92948 | Canola | mitochondrion | 16.7 | 27.65 |
| CDY65610 | Canola | mitochondrion, nucleus | 16.93 | 27.61 |
| Solyc09g082210.2.1 | Tomato | cytosol, plastid | 18.54 | 27.55 |
| PGSC0003DMT400082082 | Potato | nucleus, plastid | 18.99 | 27.48 |
| Bra023820.1-P | Field mustard | mitochondrion | 16.48 | 27.48 |
| Bra001873.1-P | Field mustard | mitochondrion | 16.48 | 27.27 |
| VIT_07s0151g00800.t01 | Wine grape | mitochondrion, nucleus | 18.08 | 26.96 |
| VIT_05s0020g03670.t01 | Wine grape | nucleus, plastid | 17.85 | 26.71 |
| KRH27651 | Soybean | plastid | 15.79 | 26.64 |
| Bra039962.1-P | Field mustard | mitochondrion, nucleus | 16.25 | 26.49 |
| CDY34246 | Canola | mitochondrion | 15.79 | 26.34 |
| KRG91310 | Soybean | nucleus, plastid | 16.02 | 26.02 |
| CDX98213 | Canola | mitochondrion | 15.56 | 25.95 |
| AT3G22550.1 | Thale cress | mitochondrion | 15.79 | 25.84 |
| CDY24316 | Canola | mitochondrion, plastid | 12.81 | 25.69 |
| KRH35505 | Soybean | nucleus, plastid | 15.56 | 25.56 |
| KRH77839 | Soybean | plastid | 14.87 | 24.9 |
| GSMUA_Achr4P22610_001 | Banana | nucleus | 20.14 | 23.4 |
| KRH32034 | Soybean | mitochondrion | 13.96 | 22.59 |
| GSMUA_Achr4P21250_001 | Banana | nucleus | 18.54 | 22.07 |
| KRH71405 | Soybean | mitochondrion, nucleus | 13.27 | 22.05 |
| Bra007736.1-P | Field mustard | plastid | 11.44 | 21.46 |
| CDX76690 | Canola | plastid | 11.44 | 21.37 |
| CDX93919 | Canola | nucleus | 11.67 | 21.34 |
| HORVU3Hr1G051540.1 | Barley | cytosol | 12.81 | 20.51 |
| CDY56452 | Canola | plastid | 10.98 | 20.34 |
| KRH67235 | Soybean | mitochondrion, nucleus | 12.81 | 19.79 |
| AT3G63210.1 | Thale cress | mitochondrion, plastid | 11.9 | 19.77 |
| HORVU3Hr1G068120.1 | Barley | cytosol | 11.67 | 19.62 |
| CDX67936 | Canola | nucleus, plastid | 10.76 | 18.43 |
| KRG95554 | Soybean | mitochondrion, nucleus | 11.44 | 17.67 |
| Bra003541.1-P | Field mustard | nucleus, plastid | 11.21 | 17.63 |
| HORVU1Hr1G026780.1 | Barley | cytosol, extracellular, plastid | 14.42 | 17.55 |
| AT1G79970.1 | Thale cress | nucleus, plastid | 9.61 | 17.5 |
| CDY53722 | Canola | extracellular, vacuole | 13.73 | 16.39 |
| CDX79402 | Canola | nucleus, plastid | 10.07 | 15.83 |
| Solyc06g009000.1.1 | Tomato | plastid | 10.07 | 15.28 |
| Bra040437.1-P | Field mustard | mitochondrion, plastid | 13.73 | 15.04 |
| PGSC0003DMT400037957 | Potato | plastid | 9.84 | 14.68 |
| HORVU3Hr1G021650.1 | Barley | nucleus | 10.53 | 10.45 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G002700.4 | EnsemblPlantsGene:HORVU4Hr1G002700 | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF65 | SEG:seg | UniParc:UPI000B489009 |
| UniProt:A0A287MXN7 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:5260193..5263786
Molecular Weight (calculated)
46454.1 Da
IEP (calculated)
10.230
GRAVY (calculated)
-0.010
Length
437 amino acids
Sequence
(BLAST)
(BLAST)
001: LRPWPWEDRA AISPRQWIGR LRAPHHLYKY ADPLPTTRKP SPTAFRRFSR RITVHPGRDF GVSSARARRV IVSLVVFLPC SSPAAATCLG ISLPTTAVFV
101: FRVPPRAPSD SLLGLLGGRA GLCVAPDRIW IEANALEAAA AIVGVVPVRP VRPSVRERCF LVFRFVRPAD AMLRNRSRRA GGGGGGLIPQ PEPLAAAAAA
201: QSSSSAPAPA LASPRPYMAL LQAGFLDGAE QGPSSSMSPT SILETKQFCC SALPPFLSER SLRKAQMETA TLGPEPASVG GLADVLREHG DAKAGGRKVV
301: FGSQLRIQVP SGRAVELVSS PIEFGVKNRD AQLAVLSPAR RFLPEVVSSP SARVFAGGVA PGEMAMSEDY TCVISRGPNP RTMHIFDDCI VESCGDVLMD
401: KVDTAGDAVP VPASGFLGSC HACHRQLAGH ANDTFHR
101: FRVPPRAPSD SLLGLLGGRA GLCVAPDRIW IEANALEAAA AIVGVVPVRP VRPSVRERCF LVFRFVRPAD AMLRNRSRRA GGGGGGLIPQ PEPLAAAAAA
201: QSSSSAPAPA LASPRPYMAL LQAGFLDGAE QGPSSSMSPT SILETKQFCC SALPPFLSER SLRKAQMETA TLGPEPASVG GLADVLREHG DAKAGGRKVV
301: FGSQLRIQVP SGRAVELVSS PIEFGVKNRD AQLAVLSPAR RFLPEVVSSP SARVFAGGVA PGEMAMSEDY TCVISRGPNP RTMHIFDDCI VESCGDVLMD
401: KVDTAGDAVP VPASGFLGSC HACHRQLAGH ANDTFHR
001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK
Arabidopsis Description
NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.