Factsheet for HORVU3Hr1G021650.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G137000.1	Wheat	cytosol	47.27	59.09
TraesCS3D01G119500.1	Wheat	cytosol	46.59	57.42
TraesCS3A01G117700.1	Wheat	cytosol	44.55	55.52
Zm00001d039597_P001	Maize	cytosol	29.09	36.06
Zm00001d008782_P001	Maize	nucleus	27.73	34.56
Bra000551.1-P	Field mustard	cytosol, mitochondrion	15.45	26.67
Bra008960.1-P	Field mustard	nucleus, plastid	15.68	25.09
HORVU1Hr1G026780.1	Barley	cytosol, extracellular, plastid	20.0	24.51
CDX97112	Canola	nucleus, plastid	15.0	24.09
CDX69754	Canola	nucleus, plastid	15.0	24.0
GSMUA_Achr7P13270_001	Banana	nucleus	19.77	23.84
GSMUA_AchrUn_...	Banana	nucleus	18.64	23.43
Bra023326.1-P	Field mustard	plastid	12.05	23.25
CDX83224	Canola	cytosol	17.05	23.01
Bra007780.1-P	Field mustard	nucleus	15.23	22.64
CDY38508	Canola	cytosol	15.91	22.51
CDX76742	Canola	nucleus	15.0	22.0
HORVU3Hr1G051540.1	Barley	cytosol	13.64	21.98
CDX85711	Canola	plastid	11.14	21.68
CDY11512	Canola	nucleus	14.77	21.67
AT2G25690.1	Thale cress	cytosol	15.45	20.99
VIT_04s0008g04490.t01	Wine grape	nucleus	18.86	20.19
AT5G11460.1	Thale cress	cytosol, plastid	15.68	20.06
KRH52543	Soybean	nucleus	19.09	19.91
HORVU3Hr1G068120.1	Barley	cytosol	11.59	19.62
KRH05019	Soybean	nucleus	17.5	19.3
KRH16080	Soybean	nucleus	17.27	18.72
KRH09840	Soybean	plastid	16.82	18.64
KRH23481	Soybean	plastid	16.82	18.59
Solyc08g067970.2.1	Tomato	nucleus	17.05	18.47
KRH61879	Soybean	extracellular	18.41	18.28
PGSC0003DMT400037607	Potato	nucleus	16.14	18.07
HORVU3Hr1G018540.1	Barley	extracellular	3.41	11.54
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	10.45	10.53

Protein Annotations

EnsemblPlants:HORVU3Hr1G021650.1	EnsemblPlantsGene:HORVU3Hr1G021650	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF12
PFAM:PF04570	PFscan:PS51795	SEG:seg	UniParc:UPI000B46929F	UniProt:A0A287KDV8	MapMan:27.3.3

Description

No Description!

Coordinates

chrchr3H:+:73222982..73225179

Molecular Weight (calculated)

31498.4 Da

IEP (calculated)

8.768

GRAVY (calculated)

-0.370

Length

440 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXVAARPQ GAAAPLAALA EDLGRGAGGA RPRCGRRPRG RRRRKRRQDL RAQPAPVPQD
201: ARMRRLHDQG LRRGGHSQPE LGGKTISCPA SATAGMSVPC SRFFHADLKS GPEAARPDGT HSGAKRHCFH LGELPGPGSL PASIAGGPRR FVGSVSASEV
301: EQSEDYTCII ARGPNPKTTH IFGDCILEPQ TTVGKGDEAT MEPKDGASAK SYLVVKRATE AAAGPGEDFL SSCFTCRKKL EGKDIYIYRG EKAFCSAECR
401: DQEIMIEEEA ENNVAIGGSP RSSCSSLHED IFMAGMMVAT

Best Arabidopsis Sequence Match ( AT5G11460.1 )
(BLAST)

001: MSQHSNYQMT TASDYYSTKP VLSAIRSHKL ISSVFEGKCP SDYESAWSPT SPLDFRLFST LGNPFAASSS RSIWRGKQRS WDSGKVGLSI VHSLVDDHHT
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG

Arabidopsis Description

At5g11460 [Source:UniProtKB/TrEMBL;Acc:Q9LYE4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.