Factsheet for HORVU3Hr1G018540.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	extracellular, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G081310.4
HORVU3Hr1G069190.1
HORVU5Hr1G025740.13
HORVU5Hr1G048120.8
HORVU5Hr1G069360.3
HORVU7Hr1G074020.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63210.1	HORVU5Hr1G069360.3	AT2G31985.1	21798944
AT3G63210.1	HORVU7Hr1G074020.2	AT2G31985.1	21798944
AT3G63210.1	HORVU5Hr1G048120.8	AT2G38270.1	21798944
AT3G63210.1	HORVU1Hr1G081310.4	AT3G29160.1	21798944
AT3G63210.1	HORVU3Hr1G069190.1	AT3G29160.1	21798944
AT3G63210.1	HORVU5Hr1G025740.13	AT5G11980.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	30.0	8.92
HORVU3Hr1G051540.1	Barley	cytosol	11.54	5.49
KRG91310	Soybean	nucleus, plastid	10.77	5.2
CDX67936	Canola	nucleus, plastid	10.0	5.1
AT1G79970.1	Thale cress	nucleus, plastid	9.23	5.0
CDY34246	Canola	mitochondrion	10.0	4.96
KRH35505	Soybean	nucleus, plastid	10.0	4.89
AT3G22550.1	Thale cress	mitochondrion	10.0	4.87
KRH32034	Soybean	mitochondrion	10.0	4.81
Solyc09g082210.2.1	Tomato	cytosol, plastid	10.77	4.76
HORVU1Hr1G026780.1	Barley	cytosol, extracellular, plastid	13.08	4.74
CDX76690	Canola	plastid	8.46	4.7
Bra003541.1-P	Field mustard	nucleus, plastid	10.0	4.68
CDY56452	Canola	plastid	8.46	4.66
PGSC0003DMT400082082	Potato	nucleus, plastid	10.77	4.64
KRH27651	Soybean	plastid	9.23	4.63
GSMUA_Achr8P20380_001	Banana	mitochondrion, nucleus	10.0	4.61
VIT_05s0020g03670.t01	Wine grape	nucleus, plastid	10.0	4.45
Solyc09g065390.1.1	Tomato	mitochondrion	6.15	4.35
Bra007736.1-P	Field mustard	plastid	7.69	4.29
KRG95554	Soybean	mitochondrion, nucleus	9.23	4.24
HORVU3Hr1G068120.1	Barley	cytosol	8.46	4.23
KRH77839	Soybean	plastid	8.46	4.21
CDX98213	Canola	mitochondrion	8.46	4.2
Bra023820.1-P	Field mustard	mitochondrion	8.46	4.2
KRH71405	Soybean	mitochondrion, nucleus	8.46	4.18
Bra001873.1-P	Field mustard	mitochondrion	8.46	4.17
CDX92948	Canola	mitochondrion	8.46	4.17
CDY65610	Canola	mitochondrion, nucleus	8.46	4.1
Bra039962.1-P	Field mustard	mitochondrion, nucleus	8.46	4.1
VIT_07s0151g00800.t01	Wine grape	mitochondrion, nucleus	9.23	4.1
CDX79402	Canola	nucleus, plastid	8.46	3.96
CDY24316	Canola	mitochondrion, plastid	6.15	3.67
KRH67235	Soybean	mitochondrion, nucleus	7.69	3.53
HORVU3Hr1G021650.1	Barley	nucleus	11.54	3.41
AT3G63210.1	Thale cress	mitochondrion, plastid	6.15	3.04
CDX93919	Canola	nucleus	5.38	2.93
CDY53722	Canola	extracellular, vacuole	6.15	2.19
PGSC0003DMT400037957	Potato	plastid	4.62	2.05
Bra040437.1-P	Field mustard	mitochondrion, plastid	6.15	2.01
Solyc06g009000.1.1	Tomato	plastid	3.85	1.74

Protein Annotations

EnsemblPlants:HORVU3Hr1G018540.1

EnsemblPlantsGene:HORVU3Hr1G018540

SEG:seg

MapMan:35.2

Description

No Description!

Coordinates

chrchr3H:-:48480164..48480657

Molecular Weight (calculated)

13190.1 Da

IEP (calculated)

12.062

GRAVY (calculated)

0.252

Length

130 amino acids

Sequence
(BLAST)

001: XGISLPTTAV FVFRVPPRAP SDSLLGLLGG RAGLCVAPDR IWIEANALEA AAAIVGVVPV RPVRPSVRER CFLVFRFVRP ADAMLRNRSR RAGGGGGGLI
101: PQPEPLAAAA AAQSSSSAPA PALASPRPYX

Best Arabidopsis Sequence Match ( AT2G35110.1 )
(BLAST)

0001: MANSRQYYPS QDESMSPTSV RSREWEGPSR WTEYLGPEMA ASVSSTRSSK QIDGHVGGST KALNIQWVVQ MIEVADGLMA KMYRLNQILE YPDPVGHVFS
0101: EAFWKAGVFP NHPRICTLLS KKFPEHFSKL QLERIDKFSL DSLHDGAELH LQSLEPWIQL LLDLMAFREQ ALRLILDLSS TVITLLPHQN SLILHAFMDL
0201: FCAFVRVNLF AEKIPRKMLL QVYNLLHALS RNDRDCDFYH RLVQFIDSYD PPLKGLQEDL NFVSPRIGEV LEAVGPSIFL SADTRKLRNE GFLSPYHPRF
0301: PDILTNSAHP MRAQDLANVT SYREWVLLGY LVCPDELLRV TSIDIALVVL KENLVVTLFR DEVSLYQMVC EKEFGIGISF ASADSINLTM QYILLHEDYQ
0401: LYVLPRVLES KKMAKSGRTK QKEADLEYSV AKQVEKMISE VHEQALQLCD TIHRERRILL KQEIGRMVLF FTDQPSLLAP NIQMVFSALA LAQSEVLWYF
0501: QHAGIASSRS KAARVIPVDI DPNDPTIGFL LDGMDRLCCL VRKYISAARG YALSYLSSSA GRIRYLMGTP GIVALDLDPT LKGLFQRIVQ HLESIPKAQG
0601: ENVSAITCDL SDFRKDWLSI LMIVTSSRSS INIRHLEKAT VSTGKEGLLS EGNAAYNWSR CVDELESQLS KHGSLKKLYF YHQHLTTVFR NTMFGPEGRP
0701: QHCCAWLSVA SSFPECASLI IPEEVTKFGR DAVLYVESLI ESIMGGLEGL INILDSEGGF GALESQLLPE QAAAYLNNAS RISAPSVKSP RVVGGFTLPG
0801: HESYPENNKS IKMLEAAIQR LTNLCSILND MEPICVINHV FVLREYMREC ILGNFKRRFL TALQTDNDLQ RPSVLESLIR RHMGIVHLAE QHVSMDLTQG
0901: IREILLTEAF SGPVSSLHTF EKPAEQQQTT GSAVEVVCNW YMDNIIKDVS GAGILFAPRH KYFKSTRPVG GYFAESVTDL KELQAFVRIF GGYGVDRLDR
1001: MMKVHTAALV NCIETSLRSN RELIEAAAAS MHSGDRVERD ASVRQIVDLD TVIGFCIEAG QALAFDDLLA EASGAVLEDN ASLIHSMISG IVEHIPEEIP
1101: EKKEIRRIKG VANGVGVAGD HDSEWVRLIL EEVGGANDNS WSLLPYFFAS FMTSNAWNTT GFNIETGGFS NNIHCLARCI SAVIAGSEYV RLQREYQQQH
1201: QSLSNGHHSS ENLDSEFPPR VTAEASIKSS MLLFVKFAAS IVLDSWSEAN RSHLVAKLIF LDQLCEISPY LPRSSLESHV PYTILRSIYT QYYSNTPSTP
1301: LSTASPYHSP SVSLIHASPS MKNSTTPQRG SGSGSSSTAA PDSGYFKGSS SSLYGQEHYT ESETGNSRNN ENNNNNKQRG SSRRSGPLDY SSSHKGGSGS
1401: NSTGPSPLPR FAVSRSGPIS YKQHN

Arabidopsis Description

NAP1Protein NAP1 [Source:UniProtKB/Swiss-Prot;Acc:Q5S2C4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.