Factsheet for Bra001873.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92948	Canola	mitochondrion	98.48	98.48
Bra039962.1-P	Field mustard	mitochondrion, nucleus	81.82	80.6
Bra023820.1-P	Field mustard	mitochondrion	78.41	79.01
AT3G22550.1	Thale cress	mitochondrion	72.73	71.91
GSMUA_Achr3P25470_001	Banana	mitochondrion	33.71	37.71
GSMUA_Achr1P14130_001	Banana	mitochondrion	36.74	33.92
GSMUA_Achr8P20380_001	Banana	mitochondrion, nucleus	35.23	32.98
Bra007736.1-P	Field mustard	plastid	28.79	32.62
Os03t0665200-01	Rice	nucleus	36.36	31.79
GSMUA_Achr2P08850_001	Banana	plastid	35.23	31.21
GSMUA_Achr9P25720_001	Banana	nucleus	38.64	31.1
TraesCS4D01G016600.1	Wheat	mitochondrion	32.95	31.07
EER91113	Sorghum	mitochondrion	34.85	29.3
TraesCS4A01G295300.1	Wheat	plastid	32.95	29.1
TraesCS4B01G018400.1	Wheat	plastid	33.33	28.95
Zm00001d013595_P001	Maize	mitochondrion	32.58	26.71
Bra000551.1-P	Field mustard	cytosol, mitochondrion	25.38	26.27
Bra007780.1-P	Field mustard	nucleus	28.79	25.68
Bra008960.1-P	Field mustard	nucleus, plastid	26.14	25.09
GSMUA_Achr4P22610_001	Banana	nucleus	35.61	25.0
GSMUA_Achr6P22030_001	Banana	cytosol	28.41	24.83
Bra023326.1-P	Field mustard	plastid	21.21	24.56
GSMUA_Achr4P21250_001	Banana	nucleus	33.33	23.98
EER94230	Sorghum	cytosol, endoplasmic reticulum, nucleus	25.0	23.49
Zm00001d032937_P001	Maize	cytosol	25.0	23.4
Os10t0422600-01	Rice	endoplasmic reticulum	28.03	21.45
Bra040437.1-P	Field mustard	mitochondrion, plastid	29.92	19.8
Bra003541.1-P	Field mustard	nucleus, plastid	20.08	19.06
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	27.27	16.48
HORVU3Hr1G018540.1	Barley	extracellular	4.17	8.46

Protein Annotations

EnsemblPlants:Bra001873.1	EnsemblPlants:Bra001873.1-P	EnsemblPlantsGene:Bra001873	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059
PANTHER:PTHR33059:SF26	PFAM:PF04570	PFscan:PS51795	SEG:seg	UniParc:UPI00025406CB	UniProt:M4CCE3
MapMan:27.3.3	:	:	:	:	:

Description

AT3G22550 (E=1e-108) | senescence-associated protein-related

Coordinates

chrA03:-:19095091..19095985

Molecular Weight (calculated)

29561.1 Da

IEP (calculated)

8.568

GRAVY (calculated)

-0.553

Length

264 amino acids

Sequence
(BLAST)

001: MLKKRSRSKQ TLMANTNQKQ SKTTPFPRLF TAFTSFKSFT ENDAVSSPTS ILDTKPLSVL KNPFGPDSLK THEPEIRLKL EPKRIGLALV DTLIKEEPGL
101: SRPRSSSILF GSQIRIRVPD YPRSSADFGT KTKNSPTSPP PEETKISVPG SGLGSARIFT GYFSTSDMEL SEDYTCVTCH GPNPRTIHIF DNCIVESKPG
201: VVFFRRSDPV HESYHLPPDS FLSTCCNCKK NLGPRDDIFI YRGDRAFCSS ECRSLEMMSE ENDF

Best Arabidopsis Sequence Match ( AT3G22550.1 )
(BLAST)

001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK

Arabidopsis Description

NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.