Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- endoplasmic reticulum 3
- plastid 1
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d032937_P001 | Maize | cytosol | 31.88 | 39.01 |
| KRH35505 | Soybean | nucleus, plastid | 24.64 | 31.95 |
| Bra007736.1-P | Field mustard | plastid | 21.45 | 31.76 |
| CDX76690 | Canola | plastid | 21.45 | 31.62 |
| KRH71405 | Soybean | mitochondrion, nucleus | 24.06 | 31.56 |
| KRG91310 | Soybean | nucleus, plastid | 24.06 | 30.86 |
| KRH32034 | Soybean | mitochondrion | 24.06 | 30.74 |
| Os03t0665200-01 | Rice | nucleus | 26.67 | 30.46 |
| CDY56452 | Canola | plastid | 20.58 | 30.08 |
| CDX93919 | Canola | nucleus | 20.58 | 29.71 |
| Bra023820.1-P | Field mustard | mitochondrion | 22.32 | 29.39 |
| CDY34246 | Canola | mitochondrion | 22.32 | 29.39 |
| AT3G22550.1 | Thale cress | mitochondrion | 22.61 | 29.21 |
| CDY65610 | Canola | mitochondrion, nucleus | 22.61 | 29.1 |
| KRH27651 | Soybean | plastid | 21.74 | 28.96 |
| VIT_05s0020g03670.t01 | Wine grape | nucleus, plastid | 24.35 | 28.77 |
| Bra039962.1-P | Field mustard | mitochondrion, nucleus | 22.32 | 28.73 |
| CDY24316 | Canola | mitochondrion, plastid | 17.97 | 28.44 |
| CDX98213 | Canola | mitochondrion | 21.45 | 28.24 |
| EER94230 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 22.9 | 28.11 |
| Bra001873.1-P | Field mustard | mitochondrion | 21.45 | 28.03 |
| CDX92948 | Canola | mitochondrion | 21.45 | 28.03 |
| KRH77839 | Soybean | plastid | 21.16 | 27.97 |
| KRH67235 | Soybean | mitochondrion, nucleus | 22.9 | 27.92 |
| KRG95554 | Soybean | mitochondrion, nucleus | 22.9 | 27.92 |
| Solyc09g082210.2.1 | Tomato | cytosol, plastid | 23.77 | 27.89 |
| Os01t0180400-01 | Rice | cytosol | 15.07 | 27.66 |
| VIT_07s0151g00800.t01 | Wine grape | mitochondrion, nucleus | 23.19 | 27.3 |
| PGSC0003DMT400082082 | Potato | nucleus, plastid | 23.77 | 27.15 |
| AT3G63210.1 | Thale cress | mitochondrion, plastid | 20.29 | 26.62 |
| Os01t0593200-01 | Rice | nucleus | 19.42 | 25.77 |
| Solyc09g065390.1.1 | Tomato | mitochondrion | 13.62 | 25.54 |
| GSMUA_Achr4P22610_001 | Banana | nucleus | 26.38 | 24.2 |
| Os01t0719000-01 | Rice | cytosol | 18.26 | 24.05 |
| Os05t0180500-01 | Rice | cytosol | 22.32 | 23.55 |
| GSMUA_Achr4P21250_001 | Banana | nucleus | 24.06 | 22.62 |
| CDY53722 | Canola | extracellular, vacuole | 23.77 | 22.4 |
| Bra040437.1-P | Field mustard | mitochondrion, plastid | 23.48 | 20.3 |
| AT1G79970.1 | Thale cress | nucleus, plastid | 13.91 | 20.0 |
| CDX67936 | Canola | nucleus, plastid | 14.2 | 19.22 |
| Bra003541.1-P | Field mustard | nucleus, plastid | 13.91 | 17.27 |
| CDX79402 | Canola | nucleus, plastid | 13.62 | 16.91 |
| Solyc06g009000.1.1 | Tomato | plastid | 13.04 | 15.62 |
| PGSC0003DMT400037957 | Potato | plastid | 12.46 | 14.68 |
Protein Annotations
| EnsemblPlants:Os10t0422600-01 | EnsemblPlantsGene:Os10g0422600 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF27 |
| PFAM:PF04570 | PFscan:PS51795 | ProteinID:BAF26545.1 | ProteinID:BAT10910.1 | SEG:seg | UniParc:UPI0000DD99A7 |
| UniProt:Q0IXM0 | MapMan:27.3.3 | : | : | : | : |
Description
Protein of unknown function DUF581 family protein. (Os10t0422600-01)
Coordinates
chr10:-:14960588..14962880
Molecular Weight (calculated)
36452.6 Da
IEP (calculated)
5.803
GRAVY (calculated)
-0.389
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: LATHTVHAAD LLRKLKITAS SACLASLASC RIIAVVIIDF DASISMLRKR AKPSSSSGGS NKQQHEIAFD HGGGGGGAAA ISAPKLLVPS SSGEASPEAV
101: LMSPTSTLQT ASATSPCSGR TTGAAATAVP FSRRRRHGGG GVGRGPADGD GQCRTHRPWD ATRPVGLGLV GALNDDEDDD DGEVDAAPGD AAASSVLTGQ
201: IRLRVQTNYY APCTEFGVKS GGAAVQYAPP PRRRWMSPRE MMEEMSEDYT CVIARGANPR TTHIFDNRVV ESSGDGEYFP PELWPPSAAG KGDDDGDGDF
301: LRYCHGCSKD LGLGKDIFMY RGEKAFCSHE CRYHEMLFDE GIEEL
101: LMSPTSTLQT ASATSPCSGR TTGAAATAVP FSRRRRHGGG GVGRGPADGD GQCRTHRPWD ATRPVGLGLV GALNDDEDDD DGEVDAAPGD AAASSVLTGQ
201: IRLRVQTNYY APCTEFGVKS GGAAVQYAPP PRRRWMSPRE MMEEMSEDYT CVIARGANPR TTHIFDNRVV ESSGDGEYFP PELWPPSAAG KGDDDGDGDF
301: LRYCHGCSKD LGLGKDIFMY RGEKAFCSHE CRYHEMLFDE GIEEL
001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK
Arabidopsis Description
NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.