Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os03t0665200-01 | |
| Os05t0102800-01 | |
| Os10t0422600-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0110000-01 | Rice | cytosol, plastid | 99.18 | 88.89 |
| TraesCS5B01G147900.4 | Wheat | plastid | 91.79 | 81.96 |
| TraesCS5D01G143600.3 | Wheat | plastid | 91.54 | 81.74 |
| TraesCS5A01G149200.2 | Wheat | plastid | 91.38 | 81.54 |
| Zm00001d023230_P006 | Maize | cytosol, plastid | 87.03 | 78.0 |
| EES16504 | Sorghum | plastid | 87.44 | 77.85 |
| OQU82706 | Sorghum | cytosol, plastid | 86.12 | 77.76 |
| GSMUA_AchrUn_... | Banana | cytosol | 76.6 | 76.04 |
| Zm00001d005063_P001 | Maize | cytosol, plastid | 71.67 | 73.48 |
| Zm00001d052327_P006 | Maize | cytosol | 82.27 | 72.24 |
| GSMUA_Achr5P14390_001 | Banana | cytosol | 76.19 | 66.62 |
| PGSC0003DMT400043895 | Potato | cytosol | 71.18 | 64.37 |
| Solyc09g014780.2.1 | Tomato | nucleus | 71.18 | 64.08 |
| AT3G08850.1 | Thale cress | cytosol | 68.8 | 62.35 |
| CDY00652 | Canola | plastid | 68.31 | 61.27 |
| CDY67456 | Canola | plastid | 68.23 | 61.19 |
| Bra001342.1-P | Field mustard | plastid | 68.23 | 61.19 |
| Bra029726.1-P | Field mustard | cytosol | 67.0 | 60.62 |
| CDY27967 | Canola | cytosol | 67.16 | 59.28 |
| AT5G01770.1 | Thale cress | cytosol | 64.61 | 58.91 |
| CDY64943 | Canola | cytosol | 55.75 | 56.63 |
| VIT_08s0058g00910.t01 | Wine grape | cytosol, extracellular, nucleus | 2.55 | 40.79 |
| GSMUA_AchrUn_... | Banana | cytosol | 2.05 | 11.85 |
| KRG88726 | Soybean | extracellular | 0.41 | 6.58 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:2.130.10.10 | MapMan:27.7.1.2 | EMBL:AP014967 | InterPro:ARM-like | InterPro:ARM-type_fold |
| ProteinID:BAH95036.1 | UniProt:C7J8E5 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008361 | GO:GO:0009056 | GO:GO:0009267 |
| GO:GO:0009605 | GO:GO:0009719 | GO:GO:0009987 | GO:GO:0009991 | GO:GO:0010506 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0019538 | GO:GO:0030307 | GO:GO:0030674 | GO:GO:0031929 | GO:GO:0031931 |
| GO:GO:0040007 | GO:GO:0071230 | GO:GO:0071902 | InterPro:IPR001680 | InterPro:IPR011989 | InterPro:IPR015943 |
| InterPro:IPR017986 | EnsemblPlantsGene:Os11g0109933 | EnsemblPlants:Os11t0109933-01 | PFAM:PF14538 | PRINTS:PR01547 | PFscan:PS50082 |
| PFscan:PS50294 | PANTHER:PTHR12848 | PANTHER:PTHR12848:SF16 | InterPro:Raptor | InterPro:Raptor_N | SMART:SM00320 |
| SMART:SM01302 | SUPFAM:SSF48371 | SUPFAM:SSF50978 | UniParc:UPI0001C7BD01 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : |
Description
RAPTOR2Component of TORC1(Target of rapamycin complex 1), Modulation of thylakoid membrane biosynthesis and thylakoid grana modeling (Os11t0109933-01);Similar to Transducin/WD-40 repeat protein (Fragment). (Os11t0109933-02)
Coordinates
chr11:-:462881..470169
Molecular Weight (calculated)
134823.0 Da
IEP (calculated)
6.615
GRAVY (calculated)
-0.153
Length
1218 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAPPKALETI GKTLHSQYER WQPKARYKLQ LDPTLEEVKK LCNTCRKFAR TERVLFHYNG HGVPKPTANG EIWVFNKSYT QYIPLPITDL DSWLKTPSIY
0101: VFDCSAAGMI VKAFLERLDW SSSSSASSSK DCILLAACEA HQTLPQSAEF PADVFTACLT TPIKMALHWF CNRSLLRDSM EHNLIDQIPG RQNDRKTLLG
0201: ELNWIFTAIT DTIAWNVLPH DLFQRLFRQD LLVASLFRNF LLAERIMRSA NCSPISYPLL PPTHQHHMWD AWDMAAEICL SKLPQLIADP NAEFQPSPFF
0301: TEQLTAFEVW LDHGSEDKKP PEQLPIVLQV LLSQSHRFRA LVLLGRFLDM GPWAVDLALS VGIFPYVLKL LQTSAMELRQ ILVFIWTKIL SLDKSCQVDL
0401: VKDGGHAYFI RFLDSLDAYP EQRAMAAFVL AVIVDGHRVG QEACANAGLI YVCLRHLQPE NPNDAQTEPL LLQWLCLCLG KLWEDFPEAQ LLGLQSNAPE
0501: IVICLLSEPQ PEVRASAVFA LGNLVDIGSP SLNGADDDSD DDEKVRAEIN VVRSLLQISS DGSPLVRSEV AVALTRFAMG HNKHIKSVAA EYWKPQTNSL
0601: LKSLPSLANI NSSNVYSPSS LIQGSSGLAS HIGPVLRVGS DNSATARDGR ISTSSPIATN SIMHGSPQSD DSSQHSDSGI LLRENASNGG LNYSRSRPID
0701: NGIYSQFIAT MCNVAKDPYP RIASIGKRAL SLIGVEQVSM RNSRLSNGGA HPGETSVPPS SNFGMARSSS WFDMNSGNFS MAFRTPPVSP PQHDYLTGLR
0801: RVCSMEFRPH VLNSPDGLAD PLLSSSAAPS NMGLDILPQS LIYRWSCGHF SRPLLTGSDD NEEANARREE RERIAMDCIA KCQRSSCKMT SQIASWDTRF
0901: ELGTKASLLL PFSPIVVAAD ENEQIRVWNY DDALPVNTFE NHKLSDRGLS KLLLINELDD SLLLVGSSDG NVRIWRNYTQ KGGQKLVTAF SSVQGYRSAG
1001: RSIVFDWQQQ SGYLYASGDM SSILVWDLDK EQLVNTIQST ADSGISALSA SQVRCGQFAA GFLDASVRIF DVRTPDRLVY TARPHAPRSE KVVGIGFQPG
1101: FDPYKIVSAS QAGDIQFLDV RRASEPYLTI EAHRGSLMAL AVHRHAPVIA SGSAKQMIKV FSLEGEQLTI IRYQPSFMGQ RIGSVNCLSF HRYKSLLAAG
1201: AGDNALVSIY AEDNYQVQ
0101: VFDCSAAGMI VKAFLERLDW SSSSSASSSK DCILLAACEA HQTLPQSAEF PADVFTACLT TPIKMALHWF CNRSLLRDSM EHNLIDQIPG RQNDRKTLLG
0201: ELNWIFTAIT DTIAWNVLPH DLFQRLFRQD LLVASLFRNF LLAERIMRSA NCSPISYPLL PPTHQHHMWD AWDMAAEICL SKLPQLIADP NAEFQPSPFF
0301: TEQLTAFEVW LDHGSEDKKP PEQLPIVLQV LLSQSHRFRA LVLLGRFLDM GPWAVDLALS VGIFPYVLKL LQTSAMELRQ ILVFIWTKIL SLDKSCQVDL
0401: VKDGGHAYFI RFLDSLDAYP EQRAMAAFVL AVIVDGHRVG QEACANAGLI YVCLRHLQPE NPNDAQTEPL LLQWLCLCLG KLWEDFPEAQ LLGLQSNAPE
0501: IVICLLSEPQ PEVRASAVFA LGNLVDIGSP SLNGADDDSD DDEKVRAEIN VVRSLLQISS DGSPLVRSEV AVALTRFAMG HNKHIKSVAA EYWKPQTNSL
0601: LKSLPSLANI NSSNVYSPSS LIQGSSGLAS HIGPVLRVGS DNSATARDGR ISTSSPIATN SIMHGSPQSD DSSQHSDSGI LLRENASNGG LNYSRSRPID
0701: NGIYSQFIAT MCNVAKDPYP RIASIGKRAL SLIGVEQVSM RNSRLSNGGA HPGETSVPPS SNFGMARSSS WFDMNSGNFS MAFRTPPVSP PQHDYLTGLR
0801: RVCSMEFRPH VLNSPDGLAD PLLSSSAAPS NMGLDILPQS LIYRWSCGHF SRPLLTGSDD NEEANARREE RERIAMDCIA KCQRSSCKMT SQIASWDTRF
0901: ELGTKASLLL PFSPIVVAAD ENEQIRVWNY DDALPVNTFE NHKLSDRGLS KLLLINELDD SLLLVGSSDG NVRIWRNYTQ KGGQKLVTAF SSVQGYRSAG
1001: RSIVFDWQQQ SGYLYASGDM SSILVWDLDK EQLVNTIQST ADSGISALSA SQVRCGQFAA GFLDASVRIF DVRTPDRLVY TARPHAPRSE KVVGIGFQPG
1101: FDPYKIVSAS QAGDIQFLDV RRASEPYLTI EAHRGSLMAL AVHRHAPVIA SGSAKQMIKV FSLEGEQLTI IRYQPSFMGQ RIGSVNCLSF HRYKSLLAAG
1201: AGDNALVSIY AEDNYQVQ
0001: MALGDLMVSR FSQSSVSLVS NHRYDEDCVS SHDDGDSRRK DSEAKSSSSY GNGTTEGAAT ATSMAYLPQT IVLCELRHDA SEASAPLGTS EIVLVPKWRL
0101: KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR KLCLTCRKYA KTERVLFHYN
0201: GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL
0301: TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM
0401: LPPTHQHHMW DAWDMAAEIC LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR ALVLLGRFLD MGSWAVDLAL
0501: SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA
0601: SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV
0701: VSDGSPLVRA EVAVALARFA FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR ESRISSSPLG SSGLMQGSPL
0801: SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD
0901: MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL
1001: EHIAKCQHSS ISKLNNNPIA NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL INELDDSLLL VASCDGSVRI
1101: WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV
1201: RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY
1301: YPSFMAQKIG SVSCLTFHPY QVLLAAGAAD SFVSIYTHDN SQAR
0101: KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR KLCLTCRKYA KTERVLFHYN
0201: GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL
0301: TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM
0401: LPPTHQHHMW DAWDMAAEIC LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR ALVLLGRFLD MGSWAVDLAL
0501: SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA
0601: SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV
0701: VSDGSPLVRA EVAVALARFA FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR ESRISSSPLG SSGLMQGSPL
0801: SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD
0901: MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL
1001: EHIAKCQHSS ISKLNNNPIA NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL INELDDSLLL VASCDGSVRI
1101: WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV
1201: RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY
1301: YPSFMAQKIG SVSCLTFHPY QVLLAAGAAD SFVSIYTHDN SQAR
Arabidopsis Description
RAPTOR1RAPTOR1B [Source:UniProtKB/TrEMBL;Acc:A0A178V9S6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.