Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- cytosol 2
- nucleus 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G08850.1 | EER91113 | AT3G22550.1 | 21798944 |
AT3G08850.1 | EER94230 | AT3G22550.1 | 21798944 |
AT3G08850.1 | EER91113 | AT3G63210.1 | 21798944 |
AT3G08850.1 | EER94230 | AT3G63210.1 | 21798944 |
AT3G08850.1 | OQU77194 | AT5G61960.1 | 15720729 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d023230_P006 | Maize | cytosol, plastid | 90.13 | 90.73 |
OQU82706 | Sorghum | cytosol, plastid | 88.74 | 89.99 |
Os11t0109933-01 | Rice | cytosol | 77.85 | 87.44 |
TraesCS5D01G143600.3 | Wheat | plastid | 85.89 | 86.14 |
TraesCS5B01G147900.4 | Wheat | plastid | 85.82 | 86.07 |
TraesCS5A01G149200.2 | Wheat | plastid | 85.6 | 85.79 |
Os12t0110000-01 | Rice | cytosol, plastid | 84.8 | 85.36 |
GSMUA_AchrUn_... | Banana | cytosol | 66.96 | 74.65 |
GSMUA_Achr5P14390_001 | Banana | cytosol | 71.86 | 70.57 |
Solyc09g014780.2.1 | Tomato | nucleus | 67.47 | 68.22 |
PGSC0003DMT400043895 | Potato | cytosol | 66.96 | 68.0 |
AT3G08850.1 | Thale cress | cytosol | 64.99 | 66.15 |
CDY00652 | Canola | plastid | 64.62 | 65.1 |
CDY67456 | Canola | plastid | 64.47 | 64.95 |
Bra001342.1-P | Field mustard | plastid | 64.47 | 64.95 |
Bra029726.1-P | Field mustard | cytosol | 63.45 | 64.49 |
CDY27967 | Canola | cytosol | 63.67 | 63.12 |
AT5G01770.1 | Thale cress | cytosol | 61.26 | 62.72 |
CDY64943 | Canola | cytosol | 53.73 | 61.3 |
KRG88726 | Soybean | extracellular | 2.56 | 46.05 |
GSMUA_AchrUn_... | Banana | cytosol | 6.8 | 44.08 |
VIT_08s0058g00910.t01 | Wine grape | cytosol, extracellular, nucleus | 2.34 | 42.11 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr8:-:776200..788469
Molecular Weight (calculated)
150205.0 Da
IEP (calculated)
6.606
GRAVY (calculated)
-0.155
Length
1368 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALGDLMASR LVHSSSSSPS PSPLRSTAAA AAPAPAPPLP NHHHHNHNQN HNHAGDGLLA ANGPEPRNGV EAAAEVEKPA PVAYLPQVVV LCEQRHEPEG
0101: IDEAAAAAAA PSTSGLVSKW RPKDRMKTGC VALVLCLNIS VDPPDVIKIS PCARTECWID PFSMAPPKAL DTIGKTLHSQ YERWQPKARY KLQLDPTVEE
0201: VKKLCNTCRK YARSERVLFH YNGHGVPKPT SNGEIWVFNK SYTQYIPLPI TDLESWLKTP SIYVFDCSAA GIIVKAFLER LDWSSSSSSS AQKDCILLAA
0301: CEAHQSLPQS EEFPADVFTA CLTTPIKMAL HWFCKRSLLR GSLDLSLIDQ IPGRQNDRKT LLGELNWIFT AITDTIAWNV LPHDLFQRLF RQDLLVASLF
0401: RNFLLAERIM RSASCSPVSY PLLPPTHQHH MWDAWDMAAE ICLSKLPELI ADPNVEFQPS PFFTEQLTAF EVWLDHGSED KKPPEQLPIV LQVLLSQSHR
0501: FRALVLLGRF LDMGPWAVDL ALSVGIFPYV LKLLQTSAME LRQILVFIWT KILSLDKSCQ VDLVKDGGHA YFVRFLDSLD AYPEQRAMAA FVLAVIVDGH
0601: RTGQEACMNA GLIDVCLRHL QPENPHDSHT EPLLLQWLCL CLGKLWEDFP DVQLLSLQTN TPEIVICLLS GPQPEVRAAA VFALGTLLDT TSNGADDDSD
0701: DDEKVKAEIN IVRSLLQISS DASPLVRSEV AIALTRFALG HNKHLKSVAA EYWKPQSNSL LKSLPSLANI SNPSNVYSPN NILQGSIGPV LRVGSDSSAA
0801: GRDGRISTSS PIATSSIMHG SPQSDDSSQH SDSGILLREN ASNGGLGYTR SRPVDNVIYS QFISTMCSFA KDPYPRIATI GRRALSLIGV EQVVMKNTRF
0901: NSGGAHRGET SASNFGMARS SSWLDMNSGS NLIKFRTPPV SPPQHDYLPG LRRVCSMEFG QHPINSPDGL ADPLLSSAAA PSNAELSILP QSTIYNWSCG
1001: HFSRPLLTGS DDNEEANARR EERERVALDY IAKCQRSSCK MTSQIASWDT RFELGTKAAL LLPFSPIVVA ADENEQIRVW NYDDALPVNS YQNHNLSDRG
1101: LSKLLLINEL DESLLLAASS DGNVRVWKNF AQKGGQKLVT AFSSVQGHRA AGRSIVIDWQ QQSGYLYASG DMSSIFVWDL DKEQLLSTIQ SSGDSAISSL
1201: TASQVCSGHF AAGFADGSVR IYDVRSTDRV VYMARPHSPR TEKVVGIGFQ PVFDPYKIVS ASQAGDIQFL DVRRAAEPYL TIEAHRGSLT ALAVHRHAPV
1301: VASGSAKQMI KVFSLEGEQL TIIRYQPSFM GQRIGSVNCL SFHPYKSLLA AGAGDNALVS IYAEENYK
0101: IDEAAAAAAA PSTSGLVSKW RPKDRMKTGC VALVLCLNIS VDPPDVIKIS PCARTECWID PFSMAPPKAL DTIGKTLHSQ YERWQPKARY KLQLDPTVEE
0201: VKKLCNTCRK YARSERVLFH YNGHGVPKPT SNGEIWVFNK SYTQYIPLPI TDLESWLKTP SIYVFDCSAA GIIVKAFLER LDWSSSSSSS AQKDCILLAA
0301: CEAHQSLPQS EEFPADVFTA CLTTPIKMAL HWFCKRSLLR GSLDLSLIDQ IPGRQNDRKT LLGELNWIFT AITDTIAWNV LPHDLFQRLF RQDLLVASLF
0401: RNFLLAERIM RSASCSPVSY PLLPPTHQHH MWDAWDMAAE ICLSKLPELI ADPNVEFQPS PFFTEQLTAF EVWLDHGSED KKPPEQLPIV LQVLLSQSHR
0501: FRALVLLGRF LDMGPWAVDL ALSVGIFPYV LKLLQTSAME LRQILVFIWT KILSLDKSCQ VDLVKDGGHA YFVRFLDSLD AYPEQRAMAA FVLAVIVDGH
0601: RTGQEACMNA GLIDVCLRHL QPENPHDSHT EPLLLQWLCL CLGKLWEDFP DVQLLSLQTN TPEIVICLLS GPQPEVRAAA VFALGTLLDT TSNGADDDSD
0701: DDEKVKAEIN IVRSLLQISS DASPLVRSEV AIALTRFALG HNKHLKSVAA EYWKPQSNSL LKSLPSLANI SNPSNVYSPN NILQGSIGPV LRVGSDSSAA
0801: GRDGRISTSS PIATSSIMHG SPQSDDSSQH SDSGILLREN ASNGGLGYTR SRPVDNVIYS QFISTMCSFA KDPYPRIATI GRRALSLIGV EQVVMKNTRF
0901: NSGGAHRGET SASNFGMARS SSWLDMNSGS NLIKFRTPPV SPPQHDYLPG LRRVCSMEFG QHPINSPDGL ADPLLSSAAA PSNAELSILP QSTIYNWSCG
1001: HFSRPLLTGS DDNEEANARR EERERVALDY IAKCQRSSCK MTSQIASWDT RFELGTKAAL LLPFSPIVVA ADENEQIRVW NYDDALPVNS YQNHNLSDRG
1101: LSKLLLINEL DESLLLAASS DGNVRVWKNF AQKGGQKLVT AFSSVQGHRA AGRSIVIDWQ QQSGYLYASG DMSSIFVWDL DKEQLLSTIQ SSGDSAISSL
1201: TASQVCSGHF AAGFADGSVR IYDVRSTDRV VYMARPHSPR TEKVVGIGFQ PVFDPYKIVS ASQAGDIQFL DVRRAAEPYL TIEAHRGSLT ALAVHRHAPV
1301: VASGSAKQMI KVFSLEGEQL TIIRYQPSFM GQRIGSVNCL SFHPYKSLLA AGAGDNALVS IYAEENYK
0001: MALGDLMVSR FSQSSVSLVS NHRYDEDCVS SHDDGDSRRK DSEAKSSSSY GNGTTEGAAT ATSMAYLPQT IVLCELRHDA SEASAPLGTS EIVLVPKWRL
0101: KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR KLCLTCRKYA KTERVLFHYN
0201: GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL
0301: TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM
0401: LPPTHQHHMW DAWDMAAEIC LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR ALVLLGRFLD MGSWAVDLAL
0501: SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA
0601: SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV
0701: VSDGSPLVRA EVAVALARFA FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR ESRISSSPLG SSGLMQGSPL
0801: SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD
0901: MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL
1001: EHIAKCQHSS ISKLNNNPIA NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL INELDDSLLL VASCDGSVRI
1101: WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV
1201: RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY
1301: YPSFMAQKIG SVSCLTFHPY QVLLAAGAAD SFVSIYTHDN SQAR
0101: KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR KLCLTCRKYA KTERVLFHYN
0201: GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL
0301: TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM
0401: LPPTHQHHMW DAWDMAAEIC LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR ALVLLGRFLD MGSWAVDLAL
0501: SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA
0601: SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV
0701: VSDGSPLVRA EVAVALARFA FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR ESRISSSPLG SSGLMQGSPL
0801: SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD
0901: MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL
1001: EHIAKCQHSS ISKLNNNPIA NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL INELDDSLLL VASCDGSVRI
1101: WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV
1201: RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY
1301: YPSFMAQKIG SVSCLTFHPY QVLLAAGAAD SFVSIYTHDN SQAR
Arabidopsis Description
RAPTOR1RAPTOR1B [Source:UniProtKB/TrEMBL;Acc:A0A178V9S6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.