Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY64943 | Canola | cytosol | 83.55 | 96.16 |
| AT3G08850.1 | Thale cress | cytosol | 88.84 | 91.22 |
| CDY67456 | Canola | plastid | 87.1 | 88.51 |
| CDY00652 | Canola | plastid | 86.96 | 88.37 |
| VIT_08s0058g00890.t01 | Wine grape | cytosol | 72.32 | 73.22 |
| KRH40797 | Soybean | nucleus | 71.96 | 72.32 |
| PGSC0003DMT400043895 | Potato | cytosol | 70.43 | 72.16 |
| KRH00387 | Soybean | nucleus | 71.3 | 72.09 |
| Solyc09g014780.2.1 | Tomato | nucleus | 70.65 | 72.06 |
| GSMUA_AchrUn_... | Banana | cytosol | 63.62 | 71.56 |
| Os11t0109933-01 | Rice | cytosol | 59.28 | 67.16 |
| GSMUA_Achr5P14390_001 | Banana | cytosol | 67.39 | 66.76 |
| TraesCS5D01G143600.3 | Wheat | plastid | 64.64 | 65.4 |
| Os12t0110000-01 | Rice | cytosol, plastid | 64.35 | 65.34 |
| TraesCS5A01G149200.2 | Wheat | plastid | 64.49 | 65.2 |
| TraesCS5B01G147900.4 | Wheat | plastid | 64.42 | 65.18 |
| OQU82706 | Sorghum | cytosol, plastid | 63.04 | 64.49 |
| EES16504 | Sorghum | plastid | 63.12 | 63.67 |
| KRH40804 | Soybean | cytosol | 6.09 | 61.31 |
| Zm00001d005064_P002 | Maize | plastid | 9.2 | 51.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 6.67 | 43.6 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:2.130.10.10 | MapMan:27.7.1.2 | GO:A0A078GS46 | UniProt:A0A078GS46 | InterPro:ARM-like |
| InterPro:ARM-type_fold | EnsemblPlants:CDY27967 | ProteinID:CDY27967 | ProteinID:CDY27967.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0031929 | GO:GO:0031931 | EnsemblPlantsGene:GSBRNA2T00038888001 | InterPro:IPR001680 |
| InterPro:IPR011989 | InterPro:IPR015943 | InterPro:IPR017986 | PFAM:PF14538 | PRINTS:PR01547 | PFscan:PS50294 |
| PANTHER:PTHR12848 | PANTHER:PTHR12848:SF16 | InterPro:Raptor | InterPro:Raptor_N | SMART:SM00320 | SMART:SM01302 |
| SUPFAM:SSF48371 | SUPFAM:SSF50978 | UniParc:UPI0004EE9E61 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : | : |
Description
BnaC05g43690DBnaC05g43690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GS46]
Coordinates
chrLK032213:+:17114..25138
Molecular Weight (calculated)
152654.0 Da
IEP (calculated)
6.585
GRAVY (calculated)
-0.158
Length
1380 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALGDLMVSR FSQSSVSLAS NHRYDEEDDD CVSSTAHGDS SVPSRRKDSE ATTSNIYGNG TEERDATATA TSMAYLPQTI VLREVRHNAS EASAPLGTSD
0101: GIALAPKWRL KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALEA IGKNLSTQYE RWQPRARYKV QLDPTLDEVR KLCLTCRKYA
0201: KTERVLFHYN GHGVPKPTAN GEIWVFNKHY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE
0301: FPADVFTACL TTPIKMALKW FCRRSLLKEI IDESLIDMIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS
0401: ANCNPISHPM LPPTHQHHMW DAWDMAAEIC LSRLPQLVRD PNTEFEPSPF FTDQLTAFEV WLDHGSELKK PPEQLPIVLQ PSPFFTEQLT AFEVWLDHGS
0501: EHKKPPEQLP IVLQVLLSQC HRFRALVLLG RFLDMGSWAV DQALSVGIFP YVLKLLQTTT NELRQILVFI WTKILALDKS CQIDLVKDGG HTYFIRFLDS
0601: LDAIPDQRAM AAFVLSVIVD GHRRGQEACL EANLIGVCLG HLELSRPSDS QQEKFLQWLC LCLGKLWEDF TEAQIMGREA NAFKKLAPLL SEPQPEVRAA
0701: AVFALGTLLD IGFGSSKSSL ENEFDDDEKI RAEEAIIKNL LDVVSDGSPL VRSEVAVALA RFAFGHKKHL KLAAASYWKP QSSSLLTSLP SIAKLHEAGN
0801: ATIVSLHMSP LTRASTESQP VAREARISSS PLSSSGLMHG SPLSDDGIMH DSVSNGAVHQ QRLFDNAVYS QCVRSMFALA KDPSPRIASL GRRVLSIIGI
0901: EQVVAKPSKT TGRLGEAATT SNTPLAGLSR SSSWFDMHAG NMPLSFRTPP VSPPRTNYLP GLRRVCSLEF RPHLTGSPDS GLADSFLGAS GSERSLLPLS
1001: TIYNWSCGHF SKPLLSEADD SQEIDTKREE KEKFALEHIA KCQHSSISKL NNNPIANWDT RFETGTKTAL LHPFSPIVVA ADENERIRVW NYEEGTLLNG
1101: FDNHDFPDKG ISKLCLVNEL DDSLLLVASC DGSVRIWKNY ATKGKQKLVT GFSSIQGHKP GARDLNAVVD WQQQSGCLYA SGEVSTVSLW DLEKEQLIRS
1201: IPSESECGVT ALSASQVHGS QLVAGFADGS LRLYDVRSPE PLVLATRPHQ KVERVVGLSF QPGLDPSKVV SASQAGDIQF LDLRTSRDTY LTIDAHRGSL
1301: TALAVHRHAP IIASGSAKQL IKVFSLEGEQ LGRILYYPSF MGQKIGSVSC LAFHPYQVLL AAGTVDSLVS VYTHDNSQAR
0101: GIALAPKWRL KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALEA IGKNLSTQYE RWQPRARYKV QLDPTLDEVR KLCLTCRKYA
0201: KTERVLFHYN GHGVPKPTAN GEIWVFNKHY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE
0301: FPADVFTACL TTPIKMALKW FCRRSLLKEI IDESLIDMIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS
0401: ANCNPISHPM LPPTHQHHMW DAWDMAAEIC LSRLPQLVRD PNTEFEPSPF FTDQLTAFEV WLDHGSELKK PPEQLPIVLQ PSPFFTEQLT AFEVWLDHGS
0501: EHKKPPEQLP IVLQVLLSQC HRFRALVLLG RFLDMGSWAV DQALSVGIFP YVLKLLQTTT NELRQILVFI WTKILALDKS CQIDLVKDGG HTYFIRFLDS
0601: LDAIPDQRAM AAFVLSVIVD GHRRGQEACL EANLIGVCLG HLELSRPSDS QQEKFLQWLC LCLGKLWEDF TEAQIMGREA NAFKKLAPLL SEPQPEVRAA
0701: AVFALGTLLD IGFGSSKSSL ENEFDDDEKI RAEEAIIKNL LDVVSDGSPL VRSEVAVALA RFAFGHKKHL KLAAASYWKP QSSSLLTSLP SIAKLHEAGN
0801: ATIVSLHMSP LTRASTESQP VAREARISSS PLSSSGLMHG SPLSDDGIMH DSVSNGAVHQ QRLFDNAVYS QCVRSMFALA KDPSPRIASL GRRVLSIIGI
0901: EQVVAKPSKT TGRLGEAATT SNTPLAGLSR SSSWFDMHAG NMPLSFRTPP VSPPRTNYLP GLRRVCSLEF RPHLTGSPDS GLADSFLGAS GSERSLLPLS
1001: TIYNWSCGHF SKPLLSEADD SQEIDTKREE KEKFALEHIA KCQHSSISKL NNNPIANWDT RFETGTKTAL LHPFSPIVVA ADENERIRVW NYEEGTLLNG
1101: FDNHDFPDKG ISKLCLVNEL DDSLLLVASC DGSVRIWKNY ATKGKQKLVT GFSSIQGHKP GARDLNAVVD WQQQSGCLYA SGEVSTVSLW DLEKEQLIRS
1201: IPSESECGVT ALSASQVHGS QLVAGFADGS LRLYDVRSPE PLVLATRPHQ KVERVVGLSF QPGLDPSKVV SASQAGDIQF LDLRTSRDTY LTIDAHRGSL
1301: TALAVHRHAP IIASGSAKQL IKVFSLEGEQ LGRILYYPSF MGQKIGSVSC LAFHPYQVLL AAGTVDSLVS VYTHDNSQAR
0001: MALGDLMVSR FSQSSVSLVS NHRYDEDCVS SHDDGDSRRK DSEAKSSSSY GNGTTEGAAT ATSMAYLPQT IVLCELRHDA SEASAPLGTS EIVLVPKWRL
0101: KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR KLCLTCRKYA KTERVLFHYN
0201: GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL
0301: TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM
0401: LPPTHQHHMW DAWDMAAEIC LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR ALVLLGRFLD MGSWAVDLAL
0501: SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA
0601: SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV
0701: VSDGSPLVRA EVAVALARFA FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR ESRISSSPLG SSGLMQGSPL
0801: SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD
0901: MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL
1001: EHIAKCQHSS ISKLNNNPIA NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL INELDDSLLL VASCDGSVRI
1101: WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV
1201: RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY
1301: YPSFMAQKIG SVSCLTFHPY QVLLAAGAAD SFVSIYTHDN SQAR
0101: KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR KLCLTCRKYA KTERVLFHYN
0201: GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL
0301: TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM
0401: LPPTHQHHMW DAWDMAAEIC LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR ALVLLGRFLD MGSWAVDLAL
0501: SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA
0601: SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV
0701: VSDGSPLVRA EVAVALARFA FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR ESRISSSPLG SSGLMQGSPL
0801: SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD
0901: MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL
1001: EHIAKCQHSS ISKLNNNPIA NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL INELDDSLLL VASCDGSVRI
1101: WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV
1201: RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY
1301: YPSFMAQKIG SVSCLTFHPY QVLLAAGAAD SFVSIYTHDN SQAR
Arabidopsis Description
RAPTOR1RAPTOR1B [Source:UniProtKB/TrEMBL;Acc:A0A178V9S6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.