Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- cytosol 3
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40797 | Soybean | nucleus | 95.9 | 95.34 |
| VIT_08s0058g00890.t01 | Wine grape | cytosol | 82.05 | 82.17 |
| Solyc09g014780.2.1 | Tomato | nucleus | 79.56 | 80.27 |
| PGSC0003DMT400043895 | Potato | cytosol | 78.97 | 80.03 |
| AT3G08850.1 | Thale cress | cytosol | 74.65 | 75.82 |
| Bra001342.1-P | Field mustard | plastid | 72.82 | 73.2 |
| CDY67456 | Canola | plastid | 72.82 | 73.2 |
| CDY00652 | Canola | plastid | 72.75 | 73.12 |
| KRH40804 | Soybean | cytosol | 7.33 | 72.99 |
| Bra029726.1-P | Field mustard | cytosol | 71.94 | 72.96 |
| CDY27967 | Canola | cytosol | 72.09 | 71.3 |
| AT5G01770.1 | Thale cress | cytosol | 69.74 | 71.26 |
| CDY64943 | Canola | cytosol | 61.69 | 70.23 |
| Zm00001d005064_P002 | Maize | plastid | 9.6 | 52.61 |
| KRG88726 | Soybean | extracellular | 2.78 | 50.0 |
| KRH65947 | Soybean | cytosol | 8.86 | 49.39 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr18:-:49597315..49611969
Molecular Weight (calculated)
149692.0 Da
IEP (calculated)
6.609
GRAVY (calculated)
-0.091
Length
1365 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALGDLMASH LSQSTVLVVP SIHSHLDDST TSAAVAAVNN SSSNDDADFA HRRDSEAAIS SSSSGNYAGN AATSMAYLPH TVFLCELRHD AFEAAVPAGP
0101: SDSGLVSKWR PKDRMKTGCV ALVLCLNISV DPPDVIKISP CARMECWIDP FSMAPQKALE SIGKTLSSQY ERWQPKARYK CQLDPTVDEV KKLCTTCRKY
0201: AKSERVLFHY NGHGVPKPTA NGEIWVFNKS YTQYIPLPIS ELDSWLKTPS IYVIDCSAAG MIVNFFIELH EWSPSNSSVS QRDCILLAAC EAHETLPQSA
0301: EFPADVFTSC LTTPIKMALR WFCTRSLLRE SLVNSLIDKI PGRPNDRKTL LGELNWIFTA VTDTIAWNVL PHDLFQRLFR QDLLVASLFR NFLLAERIMR
0401: SANCSPVSHP MLPPTHQHHM WDAWDMAAEL CLSQLPSLVE DPNSEFQRST FFTEQLTAFE VWLDHGSEHK KPPEQLPIVL QVLHSQCHRF RALVLLGRFL
0501: DMGPWAVDLA LSVGIFPYVL KLLQTTTPEL RQILVFIWTK ILALDKSCQV DLVKDGGHIY FIKFLDSMEA YPEQRAMAAF VLAVIVDGHR RGQEACIEAG
0601: LIHVCLKHLQ SSCPNDSQTE PLFLQWLCLC LGKLWEDFSE AQTIGLQEDA TTIFAPLLSE PQPEVRASAV FALGTILDVG FDSCRSVGGD EECDDDDKFR
0701: AEVSIVKSML GVASDGSPLV RAEVAVALAR FAFGHNKHLK SIAAAYWKPQ ANSLINSLPS LANIKGSVGG YAKQNQHMPY GSIVSPQIGP IRVGNDNSPV
0801: IRDGRVSSSS PLAGSGIMHG SPLSDDSSHH SDSGILNDGF SNGVVNHTGP KPLDNALYSQ CVLAMCTLAK DPSPRIANLG RRVLSIIGIE QVVAKPLKFS
0901: GVRTAESTAS PLARSSSWFD MNGGHLPLTF RTPPVSPPRP SYITRMRRVC SLEFRPHLMD SPDSGLADPL LGSGGASGTS DRSFLPQSTI YSWSCGHFSK
1001: PLLTAADDSE EASARREERE KFALEHIGKC QHSAVSRLIN PIAKWDIKGT QTALLQPFSP IVIAADENER IRIWNHEEAT LLNSFDNHDF PDKGISKLCL
1101: VNELDDSLLL AASSDGNIRI WKDYTLKGKQ KLVTAFSSIH GHKPGVRSLN AVVDWQQQCG YLYASGEISS IMLWDVDKEQ LVNSKSSSSD CSVSVLAASQ
1201: VHGGQFAAGF VDGSVRLYDV RTPDMLVCGL RPHTQRVEKV VGIGFQPGLD QGKIVSASQA GDIQFLDIRN HSSAYLTIEA HRGSLTALAV HRHAPIIASG
1301: SAKQFIKVFS LEGDQLGTIK YYPTLMAQKI GSVSCLNFHP YQVLLAAGAA DACVCIYADD NTQAR
0101: SDSGLVSKWR PKDRMKTGCV ALVLCLNISV DPPDVIKISP CARMECWIDP FSMAPQKALE SIGKTLSSQY ERWQPKARYK CQLDPTVDEV KKLCTTCRKY
0201: AKSERVLFHY NGHGVPKPTA NGEIWVFNKS YTQYIPLPIS ELDSWLKTPS IYVIDCSAAG MIVNFFIELH EWSPSNSSVS QRDCILLAAC EAHETLPQSA
0301: EFPADVFTSC LTTPIKMALR WFCTRSLLRE SLVNSLIDKI PGRPNDRKTL LGELNWIFTA VTDTIAWNVL PHDLFQRLFR QDLLVASLFR NFLLAERIMR
0401: SANCSPVSHP MLPPTHQHHM WDAWDMAAEL CLSQLPSLVE DPNSEFQRST FFTEQLTAFE VWLDHGSEHK KPPEQLPIVL QVLHSQCHRF RALVLLGRFL
0501: DMGPWAVDLA LSVGIFPYVL KLLQTTTPEL RQILVFIWTK ILALDKSCQV DLVKDGGHIY FIKFLDSMEA YPEQRAMAAF VLAVIVDGHR RGQEACIEAG
0601: LIHVCLKHLQ SSCPNDSQTE PLFLQWLCLC LGKLWEDFSE AQTIGLQEDA TTIFAPLLSE PQPEVRASAV FALGTILDVG FDSCRSVGGD EECDDDDKFR
0701: AEVSIVKSML GVASDGSPLV RAEVAVALAR FAFGHNKHLK SIAAAYWKPQ ANSLINSLPS LANIKGSVGG YAKQNQHMPY GSIVSPQIGP IRVGNDNSPV
0801: IRDGRVSSSS PLAGSGIMHG SPLSDDSSHH SDSGILNDGF SNGVVNHTGP KPLDNALYSQ CVLAMCTLAK DPSPRIANLG RRVLSIIGIE QVVAKPLKFS
0901: GVRTAESTAS PLARSSSWFD MNGGHLPLTF RTPPVSPPRP SYITRMRRVC SLEFRPHLMD SPDSGLADPL LGSGGASGTS DRSFLPQSTI YSWSCGHFSK
1001: PLLTAADDSE EASARREERE KFALEHIGKC QHSAVSRLIN PIAKWDIKGT QTALLQPFSP IVIAADENER IRIWNHEEAT LLNSFDNHDF PDKGISKLCL
1101: VNELDDSLLL AASSDGNIRI WKDYTLKGKQ KLVTAFSSIH GHKPGVRSLN AVVDWQQQCG YLYASGEISS IMLWDVDKEQ LVNSKSSSSD CSVSVLAASQ
1201: VHGGQFAAGF VDGSVRLYDV RTPDMLVCGL RPHTQRVEKV VGIGFQPGLD QGKIVSASQA GDIQFLDIRN HSSAYLTIEA HRGSLTALAV HRHAPIIASG
1301: SAKQFIKVFS LEGDQLGTIK YYPTLMAQKI GSVSCLNFHP YQVLLAAGAA DACVCIYADD NTQAR
0001: MALGDLMVSR FSQSSVSLVS NHRYDEDCVS SHDDGDSRRK DSEAKSSSSY GNGTTEGAAT ATSMAYLPQT IVLCELRHDA SEASAPLGTS EIVLVPKWRL
0101: KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR KLCLTCRKYA KTERVLFHYN
0201: GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL
0301: TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM
0401: LPPTHQHHMW DAWDMAAEIC LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR ALVLLGRFLD MGSWAVDLAL
0501: SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA
0601: SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV
0701: VSDGSPLVRA EVAVALARFA FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR ESRISSSPLG SSGLMQGSPL
0801: SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD
0901: MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL
1001: EHIAKCQHSS ISKLNNNPIA NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL INELDDSLLL VASCDGSVRI
1101: WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV
1201: RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY
1301: YPSFMAQKIG SVSCLTFHPY QVLLAAGAAD SFVSIYTHDN SQAR
0101: KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR KLCLTCRKYA KTERVLFHYN
0201: GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL
0301: TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM
0401: LPPTHQHHMW DAWDMAAEIC LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR ALVLLGRFLD MGSWAVDLAL
0501: SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA
0601: SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV
0701: VSDGSPLVRA EVAVALARFA FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR ESRISSSPLG SSGLMQGSPL
0801: SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD
0901: MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL
1001: EHIAKCQHSS ISKLNNNPIA NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL INELDDSLLL VASCDGSVRI
1101: WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV
1201: RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY
1301: YPSFMAQKIG SVSCLTFHPY QVLLAAGAAD SFVSIYTHDN SQAR
Arabidopsis Description
RAPTOR1RAPTOR1B [Source:UniProtKB/TrEMBL;Acc:A0A178V9S6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.