Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67456 | Canola | plastid | 99.78 | 99.78 |
| AT3G08850.1 | Thale cress | cytosol | 92.56 | 93.53 |
| Bra029726.1-P | Field mustard | cytosol | 87.78 | 88.56 |
| VIT_08s0058g00890.t01 | Wine grape | cytosol | 74.3 | 74.03 |
| PGSC0003DMT400043895 | Potato | cytosol | 72.97 | 73.57 |
| Solyc09g014780.2.1 | Tomato | nucleus | 73.2 | 73.47 |
| KRH40797 | Soybean | nucleus | 73.78 | 72.98 |
| KRH00387 | Soybean | nucleus | 73.2 | 72.82 |
| GSMUA_AchrUn_... | Banana | cytosol | 65.76 | 72.78 |
| Os11t0109933-01 | Rice | cytosol | 61.19 | 68.23 |
| GSMUA_Achr5P14390_001 | Banana | cytosol | 69.59 | 67.84 |
| TraesCS5D01G143600.3 | Wheat | plastid | 66.57 | 66.28 |
| Os12t0110000-01 | Rice | cytosol, plastid | 66.27 | 66.23 |
| TraesCS5B01G147900.4 | Wheat | plastid | 66.42 | 66.13 |
| TraesCS5A01G149200.2 | Wheat | plastid | 66.27 | 65.93 |
| OQU82706 | Sorghum | cytosol, plastid | 65.02 | 65.46 |
| EES16504 | Sorghum | plastid | 64.95 | 64.47 |
| KRH40804 | Soybean | cytosol | 6.33 | 62.77 |
| Zm00001d005064_P002 | Maize | plastid | 9.5 | 51.81 |
| GSMUA_AchrUn_... | Banana | cytosol | 6.55 | 42.18 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:2.130.10.10 | MapMan:27.7.1.2 | InterPro:ARM-like | InterPro:ARM-type_fold | EnsemblPlantsGene:Bra001342 |
| EnsemblPlants:Bra001342.1 | EnsemblPlants:Bra001342.1-P | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0031929 | GO:GO:0031931 | InterPro:IPR001680 | InterPro:IPR011989 | InterPro:IPR015943 | InterPro:IPR017986 |
| UniProt:M4CAW3 | PFAM:PF14538 | PRINTS:PR01547 | PFscan:PS50294 | PANTHER:PTHR12848 | PANTHER:PTHR12848:SF16 |
| InterPro:Raptor | InterPro:Raptor_N | SMART:SM00320 | SMART:SM01302 | SUPFAM:SSF48371 | SUPFAM:SSF50978 |
| UniParc:UPI000254061C | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg |
Description
AT3G08850 (E=0.0) RAPTOR1B, ATRAPTOR1B, RAPTOR1 | RAPTOR1; nucleotide binding / protein binding
Coordinates
chrA03:+:15926266..15933877
Molecular Weight (calculated)
149275.0 Da
IEP (calculated)
6.755
GRAVY (calculated)
-0.098
Length
1358 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALGDLMVSR FSQSSVSLAS SHRYDDDCVS SSQGDSSRRK DSDATSSIYG NGTAERASAT SMAYLPQTIV LRELRHDASE ASALLGTSEG IVLAPKWRLK
0101: ERMKTGCVAL VLCLNITVDP PDVIKISPCA RIEAWIDPFS MAPPKALETI GQNLSTQYER WQPRARYKVQ LDPTVDEVRK LCLTCRKYAK TERVLFHYNG
0201: HGVPKPTANG EIWVFNKSYT QYIPLPISDL DSWLKTPSIY VFDCSAARMI LNAFAELHDW GSSGSSGSTR DCILLAACDV HETLPQSVEF PADVFTACLT
0301: TPIKMALKWF CRRSLLKEII DESLIDRIPG RQNDRKTLLG ELNWIFTAVT DTIAWNVLPH ELFQRLFRQD LLVASLFRNF LLAERIMRSA NCNPISHPML
0401: PPTHQHHMWD AWDMAAEICL SHLPQLVLDP NAEFQPSPFF TEQLTAFEVW LDHGSEHKKP PEQLPIVLQV LLSQCHRFRA LVLLGRFLDM GSWAVDLALS
0501: VGIFPYVLKL LQTTTNELRQ ILVFIWTKIL ALDKSCQIDL VKDGGHTYFI RFLDSSGAFP EQRAMAAFVL AVIVDGHRRG QEACLEANLI GVCLGHLEAS
0601: IPSDPQPEPL FLQWLCLCLG KLWEDFMEAQ IMGREANAFQ KLAPLVSEPQ PEVRAAAVFA LGTLVDIGFD SSKSVVDDEF DDDEKIRAEE AIIKSLLDVV
0701: SDGSPLVRAE VAVGLARFAF GHKQHLKSAA SSYCKPQSSS LLTSLPSIAK LHDAGNAKLV SLHMSPLTRA STDSQPVARE AKISSSPLGS AGLMNGSPLS
0801: DDSSLHSDSG IMLDSVSNGA GHHQRLLDNA VYSQCIRAMF ALARDPSPRI ASLGRRVLSI IGIEQVVAKS SKPTGRLGEA ATTSNTPLTG LARSSSWFDM
0901: HAGNLPLSFR TPPVSPPRTN YLLRRVCSLE FKPHLLGSPD SGLADPPLGV SGSERSLLPL STIYSWSCGH FSKPLLGGTD ASQEIVTKRE EKEKFALEHI
1001: AKCQHSSISK LSNNPIANWD TRFETGTKTA LLHPFSPIVV AADENERIRV WNYEEATLLN GFDNHDFPDK GISKLCLINE LDDSFLLVAS CDGSVRIWKN
1101: YATKGKQKLV TGFSSIQGHK PSARDLNAVV DWQQQSGYLY ASGEVSTVAL WDLEKEQLLR SIPSESECGV TALSASQVHG GQLAAGFADG SLRLYDIRSP
1201: EPLVCATRPH QKVERVVGLS FQPGLDLAKV VSASQAGDIQ FLDLRTTKDT YLTIDAHRGS LTALAVHRHA PIIASGSAKQ LIKVFSLQGE QLGIIRYYPS
1301: FMAQKIGSVS CLAFHPYQVL LAAGAADSFV SVYTHDNSQA SLERRSKLTT DEGGGFSK
0101: ERMKTGCVAL VLCLNITVDP PDVIKISPCA RIEAWIDPFS MAPPKALETI GQNLSTQYER WQPRARYKVQ LDPTVDEVRK LCLTCRKYAK TERVLFHYNG
0201: HGVPKPTANG EIWVFNKSYT QYIPLPISDL DSWLKTPSIY VFDCSAARMI LNAFAELHDW GSSGSSGSTR DCILLAACDV HETLPQSVEF PADVFTACLT
0301: TPIKMALKWF CRRSLLKEII DESLIDRIPG RQNDRKTLLG ELNWIFTAVT DTIAWNVLPH ELFQRLFRQD LLVASLFRNF LLAERIMRSA NCNPISHPML
0401: PPTHQHHMWD AWDMAAEICL SHLPQLVLDP NAEFQPSPFF TEQLTAFEVW LDHGSEHKKP PEQLPIVLQV LLSQCHRFRA LVLLGRFLDM GSWAVDLALS
0501: VGIFPYVLKL LQTTTNELRQ ILVFIWTKIL ALDKSCQIDL VKDGGHTYFI RFLDSSGAFP EQRAMAAFVL AVIVDGHRRG QEACLEANLI GVCLGHLEAS
0601: IPSDPQPEPL FLQWLCLCLG KLWEDFMEAQ IMGREANAFQ KLAPLVSEPQ PEVRAAAVFA LGTLVDIGFD SSKSVVDDEF DDDEKIRAEE AIIKSLLDVV
0701: SDGSPLVRAE VAVGLARFAF GHKQHLKSAA SSYCKPQSSS LLTSLPSIAK LHDAGNAKLV SLHMSPLTRA STDSQPVARE AKISSSPLGS AGLMNGSPLS
0801: DDSSLHSDSG IMLDSVSNGA GHHQRLLDNA VYSQCIRAMF ALARDPSPRI ASLGRRVLSI IGIEQVVAKS SKPTGRLGEA ATTSNTPLTG LARSSSWFDM
0901: HAGNLPLSFR TPPVSPPRTN YLLRRVCSLE FKPHLLGSPD SGLADPPLGV SGSERSLLPL STIYSWSCGH FSKPLLGGTD ASQEIVTKRE EKEKFALEHI
1001: AKCQHSSISK LSNNPIANWD TRFETGTKTA LLHPFSPIVV AADENERIRV WNYEEATLLN GFDNHDFPDK GISKLCLINE LDDSFLLVAS CDGSVRIWKN
1101: YATKGKQKLV TGFSSIQGHK PSARDLNAVV DWQQQSGYLY ASGEVSTVAL WDLEKEQLLR SIPSESECGV TALSASQVHG GQLAAGFADG SLRLYDIRSP
1201: EPLVCATRPH QKVERVVGLS FQPGLDLAKV VSASQAGDIQ FLDLRTTKDT YLTIDAHRGS LTALAVHRHA PIIASGSAKQ LIKVFSLQGE QLGIIRYYPS
1301: FMAQKIGSVS CLAFHPYQVL LAAGAADSFV SVYTHDNSQA SLERRSKLTT DEGGGFSK
0001: MALGDLMVSR FSQSSVSLVS NHRYDEDCVS SHDDGDSRRK DSEAKSSSSY GNGTTEGAAT ATSMAYLPQT IVLCELRHDA SEASAPLGTS EIVLVPKWRL
0101: KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR KLCLTCRKYA KTERVLFHYN
0201: GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL
0301: TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM
0401: LPPTHQHHMW DAWDMAAEIC LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR ALVLLGRFLD MGSWAVDLAL
0501: SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA
0601: SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV
0701: VSDGSPLVRA EVAVALARFA FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR ESRISSSPLG SSGLMQGSPL
0801: SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD
0901: MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL
1001: EHIAKCQHSS ISKLNNNPIA NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL INELDDSLLL VASCDGSVRI
1101: WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV
1201: RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY
1301: YPSFMAQKIG SVSCLTFHPY QVLLAAGAAD SFVSIYTHDN SQAR
0101: KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR KLCLTCRKYA KTERVLFHYN
0201: GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL
0301: TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM
0401: LPPTHQHHMW DAWDMAAEIC LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR ALVLLGRFLD MGSWAVDLAL
0501: SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA
0601: SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV
0701: VSDGSPLVRA EVAVALARFA FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR ESRISSSPLG SSGLMQGSPL
0801: SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD
0901: MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL
1001: EHIAKCQHSS ISKLNNNPIA NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL INELDDSLLL VASCDGSVRI
1101: WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV
1201: RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY
1301: YPSFMAQKIG SVSCLTFHPY QVLLAAGAAD SFVSIYTHDN SQAR
Arabidopsis Description
RAPTOR1RAPTOR1B [Source:UniProtKB/TrEMBL;Acc:A0A178V9S6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.