Factsheet for Bra039962.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65610	Canola	mitochondrion, nucleus	95.9	95.9
Bra001873.1-P	Field mustard	mitochondrion	80.6	81.82
Bra023820.1-P	Field mustard	mitochondrion	79.48	81.3
AT3G22550.1	Thale cress	mitochondrion	75.0	75.28
GSMUA_Achr3P25470_001	Banana	mitochondrion	33.96	38.56
GSMUA_Achr1P14130_001	Banana	mitochondrion	36.57	34.27
GSMUA_Achr8P20380_001	Banana	mitochondrion, nucleus	35.82	34.04
GSMUA_Achr2P08850_001	Banana	plastid	36.57	32.89
Bra007736.1-P	Field mustard	plastid	27.61	31.76
GSMUA_Achr9P25720_001	Banana	nucleus	38.81	31.71
Os03t0665200-01	Rice	nucleus	34.7	30.79
TraesCS4D01G016600.1	Wheat	mitochondrion	31.72	30.36
EER91113	Sorghum	mitochondrion	33.96	28.98
TraesCS4A01G295300.1	Wheat	plastid	32.09	28.76
TraesCS4B01G018400.1	Wheat	plastid	32.09	28.29
Bra000551.1-P	Field mustard	cytosol, mitochondrion	25.75	27.06
Bra023326.1-P	Field mustard	plastid	22.76	26.75
Zm00001d013595_P001	Maize	mitochondrion	31.72	26.4
Bra007780.1-P	Field mustard	nucleus	29.1	26.35
Bra008960.1-P	Field mustard	nucleus, plastid	26.87	26.18
GSMUA_Achr6P22030_001	Banana	cytosol	28.73	25.5
GSMUA_Achr4P22610_001	Banana	nucleus	35.45	25.27
GSMUA_Achr4P21250_001	Banana	nucleus	33.21	24.25
EER94230	Sorghum	cytosol, endoplasmic reticulum, nucleus	24.63	23.49
Zm00001d032937_P001	Maize	cytosol	24.25	23.05
Os10t0422600-01	Rice	endoplasmic reticulum	28.73	22.32
Bra003541.1-P	Field mustard	nucleus, plastid	20.15	19.42
Bra040437.1-P	Field mustard	mitochondrion, plastid	28.36	19.05
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	26.49	16.25
HORVU3Hr1G018540.1	Barley	extracellular	4.1	8.46

Protein Annotations

EnsemblPlants:Bra039962.1	EnsemblPlants:Bra039962.1-P	EnsemblPlantsGene:Bra039962	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059
PANTHER:PTHR33059:SF26	PFAM:PF04570	PFscan:PS51795	UniParc:UPI0002547443	UniProt:M4FFT8	MapMan:27.3.3

Description

AT3G22550 (E=8e-120) | senescence-associated protein-related

Coordinates

chrA05:+:15340734..15341663

Molecular Weight (calculated)

29981.4 Da

IEP (calculated)

7.340

GRAVY (calculated)

-0.604

Length

268 amino acids

Sequence
(BLAST)

001: MLKKRSRSKQ ASLMADTNQK QSKPTPFPRL FTAFSSFKSF TENDAVASPT SILDTKPFTV LKNPFGSDYP KPHEPETRLK LEHKRIGLAI VDSLVQEENQ
101: EPGFSRPRSG TILFGSQLRI RVPDPPRSSS DFGIKTKNHP VSPPPEEMKK TVSGSGLASP RIFTGYFSTS DMELSEDYTC VTCHGPNPRT IHIFDNCIVE
201: SQPGVVFFRS SDPLNESDCL PSDSFLSTCC NCKKNLGPRD DIFMYRGDRA FCSSECRSLE MMSEENDI

Best Arabidopsis Sequence Match ( AT3G22550.1 )
(BLAST)

001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK

Arabidopsis Description

NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.