Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g082210.2.1 | Tomato | cytosol, plastid | 29.7 | 37.07 |
| GSMUA_Achr3P25470_001 | Banana | mitochondrion | 23.43 | 36.44 |
| GSMUA_Achr4P22610_001 | Banana | nucleus | 37.06 | 36.17 |
| VIT_05s0020g03670.t01 | Wine grape | nucleus, plastid | 28.61 | 35.96 |
| KRH27651 | Soybean | plastid | 25.34 | 35.91 |
| GSMUA_Achr1P14130_001 | Banana | mitochondrion | 27.79 | 35.66 |
| VIT_07s0151g00800.t01 | Wine grape | mitochondrion, nucleus | 28.34 | 35.49 |
| PGSC0003DMT400082082 | Potato | nucleus, plastid | 28.88 | 35.1 |
| KRH71405 | Soybean | mitochondrion, nucleus | 25.07 | 34.98 |
| KRH35505 | Soybean | nucleus, plastid | 25.34 | 34.96 |
| AT3G22550.1 | Thale cress | mitochondrion | 25.07 | 34.46 |
| KRH32034 | Soybean | mitochondrion | 25.34 | 34.44 |
| KRG91310 | Soybean | nucleus, plastid | 25.07 | 34.2 |
| GSMUA_Achr8P20380_001 | Banana | mitochondrion, nucleus | 25.89 | 33.69 |
| CDX98213 | Canola | mitochondrion | 23.98 | 33.59 |
| Bra023820.1-P | Field mustard | mitochondrion | 23.98 | 33.59 |
| Bra001873.1-P | Field mustard | mitochondrion | 23.98 | 33.33 |
| Bra039962.1-P | Field mustard | mitochondrion, nucleus | 24.25 | 33.21 |
| EER91113 | Sorghum | mitochondrion | 28.34 | 33.12 |
| KRH77839 | Soybean | plastid | 23.43 | 32.95 |
| CDX92948 | Canola | mitochondrion | 23.43 | 32.58 |
| CDY65610 | Canola | mitochondrion, nucleus | 23.71 | 32.46 |
| Os03t0665200-01 | Rice | nucleus | 26.7 | 32.45 |
| CDY34246 | Canola | mitochondrion | 23.16 | 32.44 |
| GSMUA_Achr2P08850_001 | Banana | plastid | 26.16 | 32.21 |
| TraesCS4D01G016600.1 | Wheat | mitochondrion | 24.52 | 32.14 |
| GSMUA_Achr9P25720_001 | Banana | nucleus | 28.61 | 32.01 |
| Zm00001d013595_P001 | Maize | mitochondrion | 28.07 | 31.99 |
| CDY24316 | Canola | mitochondrion, plastid | 18.53 | 31.19 |
| GSMUA_Achr6P22030_001 | Banana | cytosol | 25.34 | 30.79 |
| Bra007736.1-P | Field mustard | plastid | 19.35 | 30.47 |
| TraesCS4A01G295300.1 | Wheat | plastid | 24.8 | 30.43 |
| KRG95554 | Soybean | mitochondrion, nucleus | 22.89 | 29.68 |
| CDY56452 | Canola | plastid | 19.07 | 29.66 |
| Solyc09g065390.1.1 | Tomato | mitochondrion | 14.71 | 29.35 |
| TraesCS4B01G018400.1 | Wheat | plastid | 24.25 | 29.28 |
| KRH67235 | Soybean | mitochondrion, nucleus | 22.34 | 28.98 |
| CDX93919 | Canola | nucleus | 18.53 | 28.45 |
| CDX76690 | Canola | plastid | 17.98 | 28.21 |
| AT3G63210.1 | Thale cress | mitochondrion, plastid | 19.07 | 26.62 |
| Zm00001d032937_P001 | Maize | cytosol | 20.16 | 26.24 |
| Os10t0422600-01 | Rice | endoplasmic reticulum | 22.62 | 24.06 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.62 | 23.71 |
| EER94230 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 16.35 | 21.35 |
| CDX79402 | Canola | nucleus, plastid | 16.08 | 21.22 |
| GSMUA_Achr7P13270_001 | Banana | nucleus | 20.16 | 20.27 |
| Solyc06g009000.1.1 | Tomato | plastid | 15.8 | 20.14 |
| CDX67936 | Canola | nucleus, plastid | 13.62 | 19.61 |
| AT1G79970.1 | Thale cress | nucleus, plastid | 12.81 | 19.58 |
| CDY53722 | Canola | extracellular, vacuole | 19.07 | 19.13 |
| HORVU4Hr1G002700.4 | Barley | cytosol, golgi, mitochondrion | 22.07 | 18.54 |
| Bra003541.1-P | Field mustard | nucleus, plastid | 13.62 | 17.99 |
| GSMUA_Achr7P09810_001 | Banana | mitochondrion | 20.16 | 17.83 |
| PGSC0003DMT400037957 | Potato | plastid | 14.17 | 17.75 |
| Bra040437.1-P | Field mustard | mitochondrion, plastid | 19.07 | 17.54 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 15.8 | 17.42 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P21250_001 | EnsemblPlants:GSMUA_Achr4T21250_001 | EnsemblPlantsGene:GSMUA_Achr4G21250_001 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 |
| PANTHER:PTHR33059:SF26 | PFAM:PF04570 | PFscan:PS51795 | UniParc:UPI000295D96C | UniProt:M0SQT8 | MapMan:27.3.3 |
Description
Putative DUF581 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G21250_001]
Coordinates
chr4:+:21762739..21771274
Molecular Weight (calculated)
40482.8 Da
IEP (calculated)
8.387
GRAVY (calculated)
-0.440
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRSKSISKL IIYYDQHVVA PEDFQLSGKW RSKTWTWLCL LGNGDRTWFG LKRFQCQTQV FTSAEISMYQ PNIFLWKRSR AVGAKQGLMS SFHGGSSCGK
101: PAASSLLPSA RFSEAAMSPT STPETRNLSS IGNHIPPFDA ITTSSASVSD TKQHPWRNRG SRPTGLGIID ALSDEQFDTK PQRSMVLLGT KLKIQIPSLC
201: PTSNSPVGSP IEFGIKNRDS QLAHLSPAQS SPGSEMPASS PRVFAGSNFS MSEMELSEDY TCVIFHGPNP RTTHIFDSCA VEQCGDGFTR STKSRSFAAD
301: SRGYPLNESL SFCCACKKNV EQGKETFMYK GEKAFCSSEC CIKGMLDEYG IETSAQRSHH SRCDPCF
101: PAASSLLPSA RFSEAAMSPT STPETRNLSS IGNHIPPFDA ITTSSASVSD TKQHPWRNRG SRPTGLGIID ALSDEQFDTK PQRSMVLLGT KLKIQIPSLC
201: PTSNSPVGSP IEFGIKNRDS QLAHLSPAQS SPGSEMPASS PRVFAGSNFS MSEMELSEDY TCVIFHGPNP RTTHIFDSCA VEQCGDGFTR STKSRSFAAD
301: SRGYPLNESL SFCCACKKNV EQGKETFMYK GEKAFCSSEC CIKGMLDEYG IETSAQRSHH SRCDPCF
001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK
Arabidopsis Description
NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.