Factsheet for Bra023820.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34246	Canola	mitochondrion	97.33	97.33
CDX98213	Canola	mitochondrion	97.33	97.33
Bra039962.1-P	Field mustard	mitochondrion, nucleus	81.3	79.48
Bra001873.1-P	Field mustard	mitochondrion	79.01	78.41
AT3G22550.1	Thale cress	mitochondrion	72.14	70.79
GSMUA_Achr3P25470_001	Banana	mitochondrion	33.97	37.71
GSMUA_Achr8P20380_001	Banana	mitochondrion, nucleus	37.79	35.11
GSMUA_Achr1P14130_001	Banana	mitochondrion	38.17	34.97
GSMUA_Achr2P08850_001	Banana	plastid	37.79	33.22
Bra007736.1-P	Field mustard	plastid	29.39	33.05
GSMUA_Achr9P25720_001	Banana	nucleus	41.22	32.93
Os03t0665200-01	Rice	nucleus	35.88	31.13
EER91113	Sorghum	mitochondrion	36.64	30.57
TraesCS4D01G016600.1	Wheat	mitochondrion	32.44	30.36
TraesCS4A01G295300.1	Wheat	plastid	32.44	28.43
TraesCS4B01G018400.1	Wheat	plastid	32.82	28.29
Zm00001d013595_P001	Maize	mitochondrion	33.59	27.33
Bra007780.1-P	Field mustard	nucleus	30.53	27.03
Bra008960.1-P	Field mustard	nucleus, plastid	27.86	26.55
GSMUA_Achr6P22030_001	Banana	cytosol	30.53	26.49
Bra000551.1-P	Field mustard	cytosol, mitochondrion	25.57	26.27
GSMUA_Achr4P22610_001	Banana	nucleus	36.26	25.27
GSMUA_Achr4P21250_001	Banana	nucleus	33.59	23.98
Bra023326.1-P	Field mustard	plastid	20.61	23.68
Zm00001d032937_P001	Maize	cytosol	24.81	23.05
EER94230	Sorghum	cytosol, endoplasmic reticulum, nucleus	24.43	22.78
Os10t0422600-01	Rice	endoplasmic reticulum	29.39	22.32
Bra040437.1-P	Field mustard	mitochondrion, plastid	30.15	19.8
Bra003541.1-P	Field mustard	nucleus, plastid	19.47	18.35
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	27.48	16.48
HORVU3Hr1G018540.1	Barley	extracellular	4.2	8.46

Protein Annotations

EnsemblPlants:Bra023820.1	EnsemblPlants:Bra023820.1-P	EnsemblPlantsGene:Bra023820	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059
PANTHER:PTHR33059:SF26	PFAM:PF04570	PFscan:PS51795	UniParc:UPI000254417D	UniProt:M4E4W6	MapMan:27.3.3

Description

AT3G22550 (E=2e-114) | senescence-associated protein-related

Coordinates

chrA01:+:20195743..20196656

Molecular Weight (calculated)

29176.4 Da

IEP (calculated)

7.639

GRAVY (calculated)

-0.622

Length

262 amino acids

Sequence
(BLAST)

001: MLKKRSRSKQ ALMADTNQKQ SKPTPKTFPR LFTAFTSFKS FTENDAVASP TSILDTKPFS ALKNPFVSDN PKTHEPETRL KLEPTRIGLA IVQDENPVPE
101: LFSRPRSGTV LFGSQLRIRV PDSPRSSSDF GTKTKNSPVS PPPEETKKAG IGSTRIFTGY FSTSEMELSE DYTCVTCHGP NPKTIHIFDN CIVESQPGVV
201: FFRSSDPVND SDCIPPDSFL SSCCNCKKNL GPRDDIFMYR GDRAFCSSEC RSLEMMSEET DN

Best Arabidopsis Sequence Match ( AT3G22550.1 )
(BLAST)

001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK

Arabidopsis Description

NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.