CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023820.1-P	Field mustard	mitochondrion	97.33	97.33
CDX98213	Canola	mitochondrion	94.66	94.66
CDX92948	Canola	mitochondrion	77.48	76.89
CDY65610	Canola	mitochondrion, nucleus	78.63	76.87
AT3G22550.1	Thale cress	mitochondrion	71.37	70.04
CDY24316	Canola	mitochondrion, plastid	50.0	60.09
GSMUA_Achr3P25470_001	Banana	mitochondrion	33.59	37.29
GSMUA_Achr8P20380_001	Banana	mitochondrion, nucleus	37.79	35.11
GSMUA_Achr1P14130_001	Banana	mitochondrion	37.02	33.92
GSMUA_Achr2P08850_001	Banana	plastid	38.17	33.56
CDX93919	Canola	nucleus	29.77	32.64
CDX76690	Canola	plastid	28.63	32.05
GSMUA_Achr9P25720_001	Banana	nucleus	39.69	31.71
CDY56452	Canola	plastid	27.86	30.93
Os03t0665200-01	Rice	nucleus	34.73	30.13
TraesCS4D01G016600.1	Wheat	mitochondrion	31.68	29.64
EER91113	Sorghum	mitochondrion	35.5	29.62
TraesCS4A01G295300.1	Wheat	plastid	31.68	27.76
TraesCS4B01G018400.1	Wheat	plastid	32.06	27.63
GSMUA_Achr6P22030_001	Banana	cytosol	31.68	27.48
CDX69754	Canola	nucleus, plastid	28.63	27.27
Zm00001d013595_P001	Maize	mitochondrion	32.44	26.4
CDX76742	Canola	nucleus	30.15	26.33
CDX97112	Canola	nucleus, plastid	27.48	26.28
CDY11512	Canola	nucleus	29.77	26.0
GSMUA_Achr4P22610_001	Banana	nucleus	35.88	25.0
CDX83224	Canola	cytosol	30.53	24.54
CDX85711	Canola	plastid	20.99	24.34
CDY38508	Canola	cytosol	28.24	23.79
GSMUA_Achr4P21250_001	Banana	nucleus	32.44	23.16
Zm00001d032937_P001	Maize	cytosol	24.81	23.05
EER94230	Sorghum	cytosol, endoplasmic reticulum, nucleus	24.05	22.42
Os10t0422600-01	Rice	endoplasmic reticulum	29.39	22.32
CDY53722	Canola	extracellular, vacuole	29.77	21.31
CDX67936	Canola	nucleus, plastid	19.85	20.39
CDX79402	Canola	nucleus, plastid	20.61	19.42
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	26.34	15.79
HORVU3Hr1G018540.1	Barley	extracellular	4.96	10.0

Protein Annotations

EnsemblPlants:CDY34246	EnsemblPlantsGene:GSBRNA2T00056263001	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF26
PFAM:PF04570	PFscan:PS51795	ProteinID:CDY34246	ProteinID:CDY34246.1	UniParc:UPI0004EDF177	UniProt:A0A078H8Y8
MapMan:27.3.3	:	:	:	:	:

Description

BnaA01g24630DBnaA01g24630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8Y8]

Coordinates

chrLK032331:+:277297..278596

Molecular Weight (calculated)

29142.3 Da

IEP (calculated)

7.639

GRAVY (calculated)

-0.619

Length

262 amino acids

Sequence
(BLAST)

001: MLKKRSRSKQ ALMADTNQKQ SKPTPKTFPR LFTAFTSFKS FTENDAVASP TSILDTKPFS ALKNPFVSEN PKTHEPETRL KLEPTRIGLA IVQDENPVPE
101: LFSRPRSGTV LFGSQLRIRV PDSPRSSSDF GSKTKNSPVS PPPEETKKAG IGSTRILTGY FSTSEMELSE DYTCVTCHGP NPKTIHIFDN CIVESQPGVV
201: FFRSSDPVND SDCIPPDSFL SSCCNCKKNL GPRDDIFMYR GDRAFCSSEC RSLEMMSEET DN

Best Arabidopsis Sequence Match ( AT3G22550.1 )
(BLAST)

001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK

Arabidopsis Description

NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.