CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023820.1-P	Field mustard	mitochondrion	97.33	97.33
CDY34246	Canola	mitochondrion	94.66	94.66
CDX92948	Canola	mitochondrion	78.24	77.65
CDY65610	Canola	mitochondrion, nucleus	79.01	77.24
AT3G22550.1	Thale cress	mitochondrion	70.61	69.29
CDY24316	Canola	mitochondrion, plastid	50.0	60.09
GSMUA_Achr3P25470_001	Banana	mitochondrion	32.82	36.44
GSMUA_Achr1P14130_001	Banana	mitochondrion	37.79	34.62
GSMUA_Achr8P20380_001	Banana	mitochondrion, nucleus	37.02	34.4
CDX93919	Canola	nucleus	30.15	33.05
GSMUA_Achr2P08850_001	Banana	plastid	37.4	32.89
CDX76690	Canola	plastid	29.01	32.48
CDY56452	Canola	plastid	29.01	32.2
GSMUA_Achr9P25720_001	Banana	nucleus	39.69	31.71
Os03t0665200-01	Rice	nucleus	34.73	30.13
EER91113	Sorghum	mitochondrion	35.5	29.62
TraesCS4D01G016600.1	Wheat	mitochondrion	31.3	29.29
TraesCS4A01G295300.1	Wheat	plastid	31.3	27.42
CDX76742	Canola	nucleus	31.3	27.33
TraesCS4B01G018400.1	Wheat	plastid	31.68	27.3
CDY11512	Canola	nucleus	30.92	27.0
CDX69754	Canola	nucleus, plastid	28.24	26.91
Zm00001d013595_P001	Maize	mitochondrion	32.44	26.4
GSMUA_Achr6P22030_001	Banana	cytosol	29.77	25.83
CDX97112	Canola	nucleus, plastid	26.72	25.55
GSMUA_Achr4P22610_001	Banana	nucleus	36.26	25.27
CDX83224	Canola	cytosol	31.3	25.15
CDY38508	Canola	cytosol	29.39	24.76
CDX85711	Canola	plastid	20.99	24.34
GSMUA_Achr4P21250_001	Banana	nucleus	33.59	23.98
Zm00001d032937_P001	Maize	cytosol	24.43	22.7
EER94230	Sorghum	cytosol, endoplasmic reticulum, nucleus	24.05	22.42
CDY53722	Canola	extracellular, vacuole	30.15	21.58
Os10t0422600-01	Rice	endoplasmic reticulum	28.24	21.45
CDX67936	Canola	nucleus, plastid	20.23	20.78
CDX79402	Canola	nucleus, plastid	21.37	20.14
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	25.95	15.56
HORVU3Hr1G018540.1	Barley	extracellular	4.2	8.46

Protein Annotations

EnsemblPlants:CDX98213	EnsemblPlantsGene:GSBRNA2T00105683001	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF26
PFAM:PF04570	PFscan:PS51795	ProteinID:CDX98213	ProteinID:CDX98213.1	SEG:seg	UniParc:UPI0004EF0FE2
MapMan:27.3.3	:	:	:	:	:

Description

BnaC07g08850D

Coordinates

chrLK031903:-:826923..828889

Molecular Weight (calculated)

29126.4 Da

IEP (calculated)

8.322

GRAVY (calculated)

-0.602

Length

262 amino acids

Sequence
(BLAST)

001: MLKKRSRSKQ ALMADTNQKQ SKPTPKTFPR LFTAFTSFKS FTENDAVASP TSILDAKPFS ALKNPFVSDN PKTHEPETRL KLEPTRIGLA IVQDKNPVPE
101: LFSRPRSGTV LFGSQLRIRI PDSPRSSSDF GTKTKNSPVA PPPEETKKAG IGSTRIFTGY FSTSEMELSE DYTCVTCHGP NPKTIHIFGN CIVENQPGVV
201: FFRSSDPVNE SDCIPPDSFL SSCCNCKKNL GPRDDIFMYR GDRAFCSSEC RSLEMMSEET DN

Best Arabidopsis Sequence Match ( AT3G22550.1 )
(BLAST)

001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK

Arabidopsis Description

NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.