CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76742	Canola	nucleus	88.33	88.33
Bra007780.1-P	Field mustard	nucleus	83.67	84.8
CDY38508	Canola	cytosol	55.67	53.7
AT2G25690.1	Thale cress	cytosol	55.33	51.23
CDX83224	Canola	cytosol	53.0	48.77
CDX69754	Canola	nucleus, plastid	30.33	33.09
CDX85711	Canola	plastid	24.33	32.3
CDX97112	Canola	nucleus, plastid	28.67	31.39
CDX98213	Canola	mitochondrion	27.0	30.92
CDY34246	Canola	mitochondrion	26.0	29.77
CDX92948	Canola	mitochondrion	26.0	29.55
CDY65610	Canola	mitochondrion, nucleus	26.33	29.48
Os01t0180400-01	Rice	cytosol	18.33	29.26
Os01t0593200-01	Rice	nucleus	25.33	29.23
Os01t0719000-01	Rice	cytosol	24.67	28.24
CDY24316	Canola	mitochondrion, plastid	20.33	27.98
CDY56452	Canola	plastid	22.0	27.97
CDX76690	Canola	plastid	21.67	27.78
Zm00001d044365_P001	Maize	cytosol	24.33	27.65
EES00998	Sorghum	cytosol, plastid	24.67	27.31
VIT_04s0008g04490.t01	Wine grape	nucleus	36.33	26.52
HORVU3Hr1G068120.1	Barley	cytosol	22.33	25.77
GSMUA_AchrUn_...	Banana	nucleus	30.0	25.71
TraesCS3D01G215200.1	Wheat	nucleus	23.33	25.64
HORVU3Hr1G051540.1	Barley	cytosol	23.33	25.64
Solyc08g067970.2.1	Tomato	nucleus	34.67	25.62
PGSC0003DMT400037607	Potato	nucleus	33.33	25.45
TraesCS3A01G212800.1	Wheat	nucleus	22.67	25.0
TraesCS3B01G323700.2	Wheat	cytosol	22.33	24.81
KRH05019	Soybean	nucleus	33.0	24.81
CDX93919	Canola	nucleus	19.67	24.69
TraesCS3A01G289000.1	Wheat	cytosol	22.0	24.35
TraesCS3D01G288800.1	Wheat	cytosol	21.67	24.16
EES01375	Sorghum	plastid	21.0	23.95
CDX67936	Canola	nucleus, plastid	20.33	23.92
GSMUA_Achr7P13270_001	Banana	nucleus	29.0	23.84
EES00181	Sorghum	cytosol, extracellular, nucleus	22.33	23.59
TraesCS3B01G243000.2	Wheat	nucleus	24.67	23.49
KRH52543	Soybean	nucleus	32.67	23.22
Os05t0180500-01	Rice	cytosol	24.67	22.63
Zm00001d008782_P001	Maize	nucleus	26.33	22.38
KRH61879	Soybean	extracellular	33.0	22.35
KRH16080	Soybean	nucleus	30.0	22.17
TraesCS3B01G137000.1	Wheat	cytosol	26.0	22.16
TraesCS3A01G117700.1	Wheat	cytosol	26.0	22.1
CDX79402	Canola	nucleus, plastid	20.0	21.58
TraesCS3D01G119500.1	Wheat	cytosol	25.67	21.57
Zm00001d039597_P001	Maize	cytosol	25.0	21.13
Zm00001d043612_P002	Maize	plastid	17.0	20.08
TraesCS1B01G139200.1	Wheat	plastid	23.67	19.4
HORVU1Hr1G026780.1	Barley	cytosol, extracellular, plastid	23.0	19.22
Zm00001d037713_P001	Maize	cytosol	21.0	19.21
OQU77551	Sorghum	mitochondrion, plastid	23.0	18.6
GSMUA_Achr7P09810_001	Banana	mitochondrion	25.67	18.55
TraesCS1D01G120700.1	Wheat	cytosol, extracellular, plastid	24.0	18.23
TraesCS1A01G119800.1	Wheat	plastid	22.67	17.22
CDY53722	Canola	extracellular, vacuole	20.67	16.94
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	17.33	15.62
HORVU3Hr1G021650.1	Barley	nucleus	21.67	14.77

Protein Annotations

EnsemblPlants:CDY11512	EnsemblPlantsGene:GSBRNA2T00049593001	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF15
PFAM:PF04570	PFscan:PS51795	ProteinID:CDY11512	ProteinID:CDY11512.1	SEG:seg	UniParc:UPI0004EE26C3
UniProt:A0A078FEW6	MapMan:27.3.3	:	:	:	:

Description

BnaA09g40780DBnaA09g40780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FEW6]

Coordinates

chrLK032011:+:753273..754606

Molecular Weight (calculated)

33728.1 Da

IEP (calculated)

6.107

GRAVY (calculated)

-0.509

Length

300 amino acids

Sequence
(BLAST)

001: MQKTRATFRH KDQTMSQSVD RQTDLVGHNN NNNNKVITNP LAMSLLIGLK KDKCISDSDF VRSPKSPLEF KMLSTMAADP FFFRSPRSSL TAHLNCPAKV
101: GLSIVDSLGD DRVLSPDVVF GPALRIKSSD IKDKHPKSLK IEKERSGVIF EIGSFSADDC PTKTRVLSQS KFPRIGSDNA FSSEDEMEMS EDYTCIITHG
201: PNPKTTHIYG DQVLDCHKNG DDNKEKSIET ELDSMFPLDN FLRVCNFCNK KLVLGKDIYM YRGEKAFCSA ECRSEEMTID EDDLEDSCVV MHGSLKQLLF

Best Arabidopsis Sequence Match ( AT2G25690.2 )
(BLAST)

001: MLKTRAMFPH KDQAMSLSLD PQSDLVVGHT NNRPITNPLA LSLLIGLNNK NKCISDSDFV RSPKSPLEFR VLSTMADSFF LRSPRSSLTA HLNCCCGPAA
101: KVGLSIVDSL GDDRCLLPDI VFGPALRIKC SEVMDKHPKL LFPVANKSKK IENERSGVVF EIGDNSSETE PVGLRNRSFS ANDCLRKTRV LSRSKLGQEG
201: DFPGSGSDNA FSSEDDMEDY TCIIAHGPNP KTTHIYGDRV LECHKNELKG DEDNKEKFGS VFPSDNFLGI CNFCNKKLGG GDDIYMYREK SFCSEECRSE
301: EMMIDEEDLE EPCIDMHESL KKLF

Arabidopsis Description

At2g25690 [Source:UniProtKB/TrEMBL;Acc:Q9SL94]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.