Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G215200.1 | Wheat | nucleus | 95.24 | 95.24 |
| TraesCS3A01G212800.1 | Wheat | nucleus | 94.14 | 94.49 |
| TraesCS3B01G243000.2 | Wheat | nucleus | 81.69 | 70.79 |
| Os01t0593200-01 | Rice | nucleus | 63.37 | 66.54 |
| EES00998 | Sorghum | cytosol, plastid | 65.93 | 66.42 |
| Zm00001d044365_P001 | Maize | cytosol | 59.71 | 61.74 |
| HORVU3Hr1G068120.1 | Barley | cytosol | 27.47 | 28.85 |
| Bra000551.1-P | Field mustard | cytosol, mitochondrion | 26.01 | 27.84 |
| Bra008960.1-P | Field mustard | nucleus, plastid | 26.37 | 26.18 |
| CDX69754 | Canola | nucleus, plastid | 25.64 | 25.45 |
| Bra007780.1-P | Field mustard | nucleus | 27.47 | 25.34 |
| CDX97112 | Canola | nucleus, plastid | 25.27 | 25.18 |
| CDY38508 | Canola | cytosol | 27.11 | 23.79 |
| CDX76742 | Canola | nucleus | 26.01 | 23.67 |
| CDY11512 | Canola | nucleus | 25.64 | 23.33 |
| CDX83224 | Canola | cytosol | 27.11 | 22.7 |
| CDX85711 | Canola | plastid | 18.68 | 22.57 |
| PGSC0003DMT400037607 | Potato | nucleus | 32.23 | 22.39 |
| Bra023326.1-P | Field mustard | plastid | 18.32 | 21.93 |
| Solyc08g067970.2.1 | Tomato | nucleus | 32.6 | 21.92 |
| KRH52543 | Soybean | nucleus | 33.33 | 21.56 |
| AT2G25690.1 | Thale cress | cytosol | 25.27 | 21.3 |
| AT5G11460.1 | Thale cress | cytosol, plastid | 26.37 | 20.93 |
| VIT_04s0008g04490.t01 | Wine grape | nucleus | 30.4 | 20.19 |
| KRH61879 | Soybean | extracellular | 32.23 | 19.86 |
| GSMUA_Achr7P09810_001 | Banana | mitochondrion | 29.67 | 19.52 |
| KRH09840 | Soybean | plastid | 27.84 | 19.14 |
| KRH23481 | Soybean | plastid | 27.84 | 19.1 |
| KRH05019 | Soybean | nucleus | 27.84 | 19.05 |
| KRH16080 | Soybean | nucleus | 27.84 | 18.72 |
| HORVU1Hr1G026780.1 | Barley | cytosol, extracellular, plastid | 22.34 | 16.99 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 19.41 | 15.92 |
| HORVU3Hr1G021650.1 | Barley | nucleus | 21.98 | 13.64 |
| HORVU4Hr1G002700.4 | Barley | cytosol, golgi, mitochondrion | 20.51 | 12.81 |
| HORVU3Hr1G018540.1 | Barley | extracellular | 5.49 | 11.54 |
Protein Annotations
| EMBL:AK369295 | EnsemblPlants:HORVU3Hr1G051540.1 | EnsemblPlantsGene:HORVU3Hr1G051540 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 |
| PANTHER:PTHR33059:SF18 | PFAM:PF04570 | PFscan:PS51795 | SEG:seg | UniParc:UPI0002007665 | UniProt:F2DZH5 |
| MapMan:27.3.3 | : | : | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DZH5]
Coordinates
chrchr3H:-:373103521..373106827
Molecular Weight (calculated)
29855.2 Da
IEP (calculated)
4.381
GRAVY (calculated)
-0.348
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAESSVPQT SSESAAHKMG FFRVPDLLVK LSTKCLIELD AVRSPTSPLD LKLFTNLATK SPRSSFLDAG AASQNQKILL GDRVGLGLVD SLTDENNPTP
101: LGSRKVLLGS EMRITDNLTP KNSSTAPNQA GLLEQKDEIM SDGLNGSIMS LDDIVNSEDY TCVVTRGPNP RTTHIFGDRV FEFQAEQLMP HVGGCEESLA
201: PHLNGDTMSF CCFCTDKLKD GKDIYIYQGD KAFCSMECRE NFMEDELEGE PSIDHSDPSG PSFDNCRIFQ LIQ
101: LGSRKVLLGS EMRITDNLTP KNSSTAPNQA GLLEQKDEIM SDGLNGSIMS LDDIVNSEDY TCVVTRGPNP RTTHIFGDRV FEFQAEQLMP HVGGCEESLA
201: PHLNGDTMSF CCFCTDKLKD GKDIYIYQGD KAFCSMECRE NFMEDELEGE PSIDHSDPSG PSFDNCRIFQ LIQ
001: MLKTRAMFPH KDQAMSLSLD PQSDLVVGHT NNRPITNPLA LSLLIGLNNK NKCISDSDFV RSPKSPLEFR VLSTMADSFF LRSPRSSLTA HLNCCCGPAA
101: KVGLSIVDSL GDDRCLLPDI VFGPALRIKC SEVMDKHPKL LFPVANKSKK IENERSGVVF EIGDNSSETE PVGLRNRSFS ANDCLRKTRV LSRSKLGQEG
201: DFPGSGSDNA FSSEDDMEDY TCIIAHGPNP KTTHIYGDRV LECHKNELKG DEDNKEKFGS VFPSDNFLGI CNFCNKKLGG GDDIYMYREK SFCSEECRSE
301: EMMIDEEDLE EPCIDMHESL KKLF
101: KVGLSIVDSL GDDRCLLPDI VFGPALRIKC SEVMDKHPKL LFPVANKSKK IENERSGVVF EIGDNSSETE PVGLRNRSFS ANDCLRKTRV LSRSKLGQEG
201: DFPGSGSDNA FSSEDDMEDY TCIIAHGPNP KTTHIYGDRV LECHKNELKG DEDNKEKFGS VFPSDNFLGI CNFCNKKLGG GDDIYMYREK SFCSEECRSE
301: EMMIDEEDLE EPCIDMHESL KKLF
Arabidopsis Description
At2g25690 [Source:UniProtKB/TrEMBL;Acc:Q9SL94]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.