CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05019	Soybean	nucleus	52.22	53.13
KRH52543	Soybean	nucleus	45.07	43.36
VIT_04s0008g04490.t01	Wine grape	nucleus	38.18	37.71
KRH61879	Soybean	extracellular	40.39	37.02
Os01t0180400-01	Rice	cytosol	16.75	36.17
Bra008960.1-P	Field mustard	nucleus, plastid	22.41	33.09
Solyc08g067970.2.1	Tomato	nucleus	32.76	32.76
CDX97112	Canola	nucleus, plastid	21.43	31.75
PGSC0003DMT400037607	Potato	nucleus	30.54	31.55
Os01t0593200-01	Rice	nucleus	19.95	31.15
KRH67235	Soybean	mitochondrion, nucleus	21.67	31.1
KRG91310	Soybean	nucleus, plastid	20.44	30.86
KRH35505	Soybean	nucleus, plastid	20.2	30.83
KRG95554	Soybean	mitochondrion, nucleus	21.43	30.74
CDX69754	Canola	nucleus, plastid	20.69	30.55
GSMUA_AchrUn_...	Banana	nucleus	26.11	30.29
CDY11512	Canola	nucleus	22.17	30.0
EES00998	Sorghum	cytosol, plastid	19.95	29.89
Bra000551.1-P	Field mustard	cytosol, mitochondrion	18.72	29.8
GSMUA_Achr7P13270_001	Banana	nucleus	26.6	29.59
KRH27651	Soybean	plastid	18.72	29.34
CDX76742	Canola	nucleus	21.67	29.33
CDY38508	Canola	cytosol	22.41	29.26
KRH32034	Soybean	mitochondrion	19.46	29.26
Bra007780.1-P	Field mustard	nucleus	21.18	29.05
CDX83224	Canola	cytosol	23.15	28.83
Zm00001d044365_P001	Maize	cytosol	18.72	28.79
AT5G11460.1	Thale cress	cytosol, plastid	24.38	28.78
TraesCS3B01G137000.1	Wheat	cytosol	24.63	28.41
Zm00001d039597_P001	Maize	cytosol	24.63	28.17
Bra023326.1-P	Field mustard	plastid	15.76	28.07
TraesCS3A01G117700.1	Wheat	cytosol	24.38	28.05
KRH77839	Soybean	plastid	17.98	27.97
HORVU3Hr1G051540.1	Barley	cytosol	18.72	27.84
TraesCS3D01G215200.1	Wheat	nucleus	18.72	27.84
TraesCS3D01G119500.1	Wheat	cytosol	24.38	27.73
TraesCS3A01G212800.1	Wheat	nucleus	18.47	27.57
KRH09840	Soybean	plastid	26.85	27.46
Os05t0180500-01	Rice	cytosol	21.92	27.22
EES00181	Sorghum	cytosol, extracellular, nucleus	18.97	27.11
Zm00001d008782_P001	Maize	nucleus	23.4	26.91
KRH23481	Soybean	plastid	26.35	26.88
KRH71405	Soybean	mitochondrion, nucleus	17.24	26.62
AT2G25690.1	Thale cress	cytosol	20.94	26.23
CDX85711	Canola	plastid	14.53	26.11
TraesCS3B01G243000.2	Wheat	nucleus	19.7	25.4
Os01t0719000-01	Rice	cytosol	16.26	25.19
TraesCS3B01G323700.2	Wheat	cytosol	16.5	24.81
TraesCS3A01G289000.1	Wheat	cytosol	16.5	24.72
Zm00001d037713_P001	Maize	cytosol	19.95	24.7
TraesCS1B01G139200.1	Wheat	plastid	21.92	24.32
HORVU3Hr1G068120.1	Barley	cytosol	15.52	24.23
TraesCS3D01G288800.1	Wheat	cytosol	16.01	24.16
GSMUA_Achr7P09810_001	Banana	mitochondrion	24.14	23.61
OQU77551	Sorghum	mitochondrion, plastid	21.43	23.45
Zm00001d043612_P002	Maize	plastid	14.29	22.83
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	18.72	22.82
TraesCS1D01G120700.1	Wheat	cytosol, extracellular, plastid	21.92	22.53
HORVU1Hr1G026780.1	Barley	cytosol, extracellular, plastid	19.46	22.01
EES01375	Sorghum	plastid	13.79	21.29
TraesCS1A01G119800.1	Wheat	plastid	20.69	21.27
HORVU3Hr1G021650.1	Barley	nucleus	18.72	17.27

Protein Annotations

EMBL:ACUP02008777	EnsemblPlants:KRH16080	EnsemblPlantsGene:GLYMA_14G130800	EntrezGene:100789230	InterPro:IPR007650	InterPro:Zf-FLZ_dom
PANTHER:PTHR33059	PANTHER:PTHR33059:SF15	PFAM:PF04570	PFscan:PS51795	ProteinID:KRH16080	ProteinID:KRH16080.1
ProteinID:KRH16081.1	UniParc:UPI000296DC8A	UniProt:K7M6H9	MapMan:27.3.3	:	:

Description

hypothetical protein

Coordinates

chr14:-:22346539..22349209

Molecular Weight (calculated)

44638.4 Da

IEP (calculated)

6.016

GRAVY (calculated)

-0.471

Length

406 amino acids

Sequence
(BLAST)

001: MLRKRTRSIQ KDQHHTGQMA ISDTNSESHA LGGNGKSNSI FNAPLLFVGM GHKGLLDCDS VKSPTSPLDF GFLSNLSNPF RTPSSLSNEG PHRSWDCAKV
101: GLSIIDSLEE CSKFSWKILQ ASESKKTSLC PQMITKAPKC KSYMDSTQAS KSLPKDFCKI PCTQNGSIVP KGESTVLFEI GETPLEHEFF GKAVSFSLDS
201: YSPTKYLSGL TGSNFDTDSE NFALKQMCSP PHFIGGSQNN TKILLPSELN SNPVAAVYSN EFIESLSACE IENSEDYTCV ISHGPNAKTT HIFCGCILET
301: HANDSERHYK AEEEGKGLSL FSVNILHTPN QYPSHDFLSV CYHCNKKLEE GKDIYIYRGE KSFCSLSCRE IEIMMDEQEK SNSSPENSPK CGFGGEVFET
401: GTPIAT

Best Arabidopsis Sequence Match ( AT5G11460.1 )
(BLAST)

001: MSQHSNYQMT TASDYYSTKP VLSAIRSHKL ISSVFEGKCP SDYESAWSPT SPLDFRLFST LGNPFAASSS RSIWRGKQRS WDSGKVGLSI VHSLVDDHHT
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG

Arabidopsis Description

At5g11460 [Source:UniProtKB/TrEMBL;Acc:Q9LYE4]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.