Factsheet for TraesCS3A01G117700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G119500.1	Wheat	cytosol	89.52	88.52
TraesCS3B01G137000.1	Wheat	cytosol	86.12	86.36
Zm00001d039597_P001	Maize	cytosol	51.56	51.27
Zm00001d008782_P001	Maize	nucleus	49.86	49.86
HORVU3Hr1G021650.1	Barley	nucleus	55.52	44.55
TraesCS1A01G119800.1	Wheat	plastid	36.83	32.91
GSMUA_AchrUn_...	Banana	nucleus	30.88	31.14
GSMUA_Achr7P13270_001	Banana	nucleus	31.44	30.41
Bra000551.1-P	Field mustard	cytosol, mitochondrion	21.25	29.41
TraesCS3A01G212800.1	Wheat	nucleus	22.1	28.68
CDX97112	Canola	nucleus, plastid	21.81	28.1
Bra023326.1-P	Field mustard	plastid	18.13	28.07
Bra008960.1-P	Field mustard	nucleus, plastid	21.81	28.0
TraesCS4A01G295300.1	Wheat	plastid	23.51	27.76
CDY38508	Canola	cytosol	24.08	27.33
CDX69754	Canola	nucleus, plastid	21.25	27.27
CDX83224	Canola	cytosol	24.65	26.69
Bra007780.1-P	Field mustard	nucleus	22.1	26.35
CDX76742	Canola	nucleus	22.38	26.33
CDX85711	Canola	plastid	16.71	26.11
CDY11512	Canola	nucleus	22.1	26.0
KRH52543	Soybean	nucleus	30.59	25.59
VIT_04s0008g04490.t01	Wine grape	nucleus	29.75	25.55
AT2G25690.1	Thale cress	cytosol	22.95	25.0
KRH16080	Soybean	nucleus	28.05	24.38
TraesCS3A01G289000.1	Wheat	cytosol	18.7	24.35
KRH05019	Soybean	nucleus	27.48	24.31
AT5G11460.1	Thale cress	cytosol, plastid	22.1	22.67
Solyc08g067970.2.1	Tomato	nucleus	25.78	22.41
KRH09840	Soybean	plastid	24.93	22.17
PGSC0003DMT400037607	Potato	nucleus	24.65	22.14
KRH61879	Soybean	extracellular	27.76	22.12
KRH23481	Soybean	plastid	24.93	22.11

Protein Annotations

EnsemblPlants:TraesCS3A01G117700.1	EnsemblPlantsGene:TraesCS3A01G117700	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF12
PFAM:PF04570	PFscan:PS51795	SEG:seg	MapMan:27.3.3	:	:

Description

No Description!

Coordinates

chr3A:+:88189718..88191057

Molecular Weight (calculated)

36280.9 Da

IEP (calculated)

6.690

GRAVY (calculated)

-0.259

Length

353 amino acids

Sequence
(BLAST)

001: MLRRMVSDQG PGSAGGSGGD ARPRGGGGGG ALFAVPRLFI GLAAAKRAPD ESERSPTSPL DPKALLLRSP RSPRTWDAEP VGLGLVVDVA LAAGADAAAA
101: KTCVLSPRLR LRTHGCAGST AKGCGGGGHS QPELGGKTIS CPASATAGMS VPCSRFFHED LKSGPEAGQP DGAHSGAKRH CFHLGELPGP GSLPASIAGG
201: PRRFVGSVSA SEVEQSEDYT CIIARGPNPK TTHIFGDCIL EPQTTVGKSD EAAVEPKDGA SAKSYLVVKR ATEAAAGPGE DFLSSCFTCT KKLEGNDIYI
301: YRGEKAFCSA ECRDQEIMIE EEAEKCMATG GSPRSSCSSL HEDIFMAGMM VAT

Best Arabidopsis Sequence Match ( AT5G11460.1 )
(BLAST)

001: MSQHSNYQMT TASDYYSTKP VLSAIRSHKL ISSVFEGKCP SDYESAWSPT SPLDFRLFST LGNPFAASSS RSIWRGKQRS WDSGKVGLSI VHSLVDDHHT
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG

Arabidopsis Description

At5g11460 [Source:UniProtKB/TrEMBL;Acc:Q9LYE4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.