Factsheet for Zm00001d039597_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008782_P001	Maize	nucleus	62.82	63.17
TraesCS3D01G119500.1	Wheat	cytosol	54.65	54.34
TraesCS3B01G137000.1	Wheat	cytosol	52.11	52.56
TraesCS3A01G117700.1	Wheat	cytosol	51.27	51.56
Zm00001d037713_P001	Maize	cytosol	34.37	37.2
GSMUA_Achr7P13270_001	Banana	nucleus	33.52	32.6
GSMUA_AchrUn_...	Banana	nucleus	30.7	31.14
CDX97112	Canola	nucleus, plastid	22.54	29.2
HORVU3Hr1G021650.1	Barley	nucleus	36.06	29.09
Bra008960.1-P	Field mustard	nucleus, plastid	21.97	28.36
CDX69754	Canola	nucleus, plastid	21.69	28.0
Zm00001d044365_P001	Maize	cytosol	20.56	27.65
Zm00001d043612_P002	Maize	plastid	19.44	27.17
Bra000551.1-P	Field mustard	cytosol, mitochondrion	19.44	27.06
VIT_04s0008g04490.t01	Wine grape	nucleus	30.99	26.76
Zm00001d013595_P001	Maize	mitochondrion	23.94	26.4
Bra007780.1-P	Field mustard	nucleus	21.69	26.01
CDX76742	Canola	nucleus	21.69	25.67
Zm00001d032937_P001	Maize	cytosol	20.28	25.53
Bra023326.1-P	Field mustard	plastid	16.34	25.44
CDX85711	Canola	plastid	16.06	25.22
CDY11512	Canola	nucleus	21.13	25.0
KRH52543	Soybean	nucleus	29.58	24.88
CDX83224	Canola	cytosol	22.82	24.85
CDY38508	Canola	cytosol	21.69	24.76
PGSC0003DMT400037607	Potato	nucleus	27.32	24.68
Solyc08g067970.2.1	Tomato	nucleus	28.17	24.63
KRH16080	Soybean	nucleus	28.17	24.63
KRH61879	Soybean	extracellular	30.42	24.38
KRH05019	Soybean	nucleus	27.04	24.06
KRH23481	Soybean	plastid	25.63	22.86
AT2G25690.1	Thale cress	cytosol	20.56	22.53
KRH09840	Soybean	plastid	24.79	22.17
AT5G11460.1	Thale cress	cytosol, plastid	21.41	22.09

Protein Annotations

EnsemblPlants:Zm00001d039597_P001	EnsemblPlants:Zm00001d039597_T001	EnsemblPlantsGene:Zm00001d039597	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059
PANTHER:PTHR33059:SF12	PFAM:PF04570	PFscan:PS51795	ProteinID:ONM29404.1	SEG:seg	UniParc:UPI000842A0A7
UniProt:A0A1D6MJB0	MapMan:27.3.3	:	:	:	:

Description

Protein MARD1

Coordinates

chr3:+:8669243..8671574

Molecular Weight (calculated)

36332.6 Da

IEP (calculated)

8.120

GRAVY (calculated)

-0.336

Length

355 amino acids

Sequence
(BLAST)

001: MLRRMVPDPS SPDSSGGGGD ARPRGGGGAL FAVPRLFVGF AAKRVAPDGE SSRSPTSPLD PKALLLRSPR SPRRTWGAPG LVDALAADTA AANCLLSPRL
101: RLVRQHSSPP KGCGGHSQPE LGKTMSCCPA PDTAAAGAGA GAGMSVPCPC SRFQLRHGDL KSGPEATGSA DTGAHLASKR HSFDLGKLPG PGSLPVPASA
201: SASSSAARRF VGSVSASEIE QSEDYTRIIA RGPNPKTTHI FGDCILEPRT VGCGDSKAVE SGEGGAGCYF VVKRAAPGAG DFLSSCFACK KKLEGNDIYI
301: YRGEKAFCSA NCRDQEIQLE EEAENNTSSG SPGSSSSSSS SSNDDIFMAG MVVAT

Best Arabidopsis Sequence Match ( AT3G63210.1 )
(BLAST)

001: MLRNKPRAAV TTKKQTSLLM ADQPPPPKPN TCHCSPSLFS SPKFRFFTSK MMMTPFDSDF SLVSPTSILE ANPSIFSSKN PKPVSYFEPT IPNPQRFHSP
101: DVFGLADLVK DGDSNRDHSR KPVNKMVLFG SKLRVQIPSS ADFGTKTGIR YPPCQLSPCV QTKVLAVSEI DQTEDYTRVI SHGPNPTITH IFDNSVFVEA
201: TPCSVPLPQP AMETKSTESF LSRCFTCKKN LDQKQDIYIY RGEKGFCSSE CRYQEMLLDQ MET

Arabidopsis Description

MARD1Protein MARD1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGS1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.