Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU77551 | Sorghum | mitochondrion, plastid | 54.27 | 47.98 |
| Os05t0180500-01 | Rice | cytosol | 44.21 | 44.34 |
| TraesCS1B01G139200.1 | Wheat | plastid | 45.73 | 40.98 |
| HORVU1Hr1G026780.1 | Barley | cytosol, extracellular, plastid | 42.07 | 38.44 |
| TraesCS1A01G119800.1 | Wheat | plastid | 44.51 | 36.96 |
| TraesCS1D01G120700.1 | Wheat | cytosol, extracellular, plastid | 42.38 | 35.19 |
| Zm00001d039597_P001 | Maize | cytosol | 37.2 | 34.37 |
| Zm00001d008782_P001 | Maize | nucleus | 34.45 | 32.01 |
| GSMUA_Achr7P13270_001 | Banana | nucleus | 28.96 | 26.03 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.83 | 25.14 |
| Zm00001d044365_P001 | Maize | cytosol | 18.29 | 22.73 |
| Bra000551.1-P | Field mustard | cytosol, mitochondrion | 16.77 | 21.57 |
| Bra008960.1-P | Field mustard | nucleus, plastid | 17.99 | 21.45 |
| Zm00001d013595_P001 | Maize | mitochondrion | 21.04 | 21.43 |
| VIT_04s0008g04490.t01 | Wine grape | nucleus | 26.83 | 21.41 |
| CDX69754 | Canola | nucleus, plastid | 17.68 | 21.09 |
| CDY11512 | Canola | nucleus | 19.21 | 21.0 |
| CDX76742 | Canola | nucleus | 19.21 | 21.0 |
| Bra007780.1-P | Field mustard | nucleus | 18.9 | 20.95 |
| CDX83224 | Canola | cytosol | 20.43 | 20.55 |
| CDY38508 | Canola | cytosol | 19.21 | 20.26 |
| KRH16080 | Soybean | nucleus | 24.7 | 19.95 |
| AT2G25690.1 | Thale cress | cytosol | 19.51 | 19.75 |
| CDX97112 | Canola | nucleus, plastid | 16.46 | 19.71 |
| Zm00001d032937_P001 | Maize | cytosol | 16.77 | 19.5 |
| KRH09840 | Soybean | plastid | 23.17 | 19.14 |
| KRH23481 | Soybean | plastid | 23.17 | 19.1 |
| Solyc08g067970.2.1 | Tomato | nucleus | 23.48 | 18.97 |
| KRH52543 | Soybean | nucleus | 24.39 | 18.96 |
| PGSC0003DMT400037607 | Potato | nucleus | 22.56 | 18.83 |
| KRH05019 | Soybean | nucleus | 22.87 | 18.8 |
| Zm00001d043612_P002 | Maize | plastid | 14.33 | 18.5 |
| KRH61879 | Soybean | extracellular | 24.09 | 17.83 |
| AT5G11460.1 | Thale cress | cytosol, plastid | 18.29 | 17.44 |
| CDX85711 | Canola | plastid | 11.59 | 16.81 |
| Bra023326.1-P | Field mustard | plastid | 11.28 | 16.23 |
Protein Annotations
| EnsemblPlants:Zm00001d037713_P001 | EnsemblPlants:Zm00001d037713_T001 | EnsemblPlantsGene:Zm00001d037713 | EntrezGene:100276854 | EntrezGene:100304333 | PANTHER:PTHR33059 |
| PANTHER:PTHR33059:SF12 | ProteinID:AQK84644.1 | SEG:seg | UniParc:UPI000843EEFF | UniProt:A0A1D6M003 | MapMan:35.2 |
Description
Protein MARD1
Coordinates
chr6:-:134933417..134935700
Molecular Weight (calculated)
34162.4 Da
IEP (calculated)
6.041
GRAVY (calculated)
-0.260
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLKRVAADD GSGAGAGAGV GRPRLFAMPR LLVGLEAPRC GAPDCDSPMT ARSPTSPLDL RPFASLLRSP RSPRTRSWDS HRLGLGGLVD DTLAEPVACA
101: RSRLLGLGPQ ARQPFKLPQR LAKPLATQPR DCSHASSELG NVGTAAGCKP LPCSRSYGDV KSGPEVTVPG GAPPGASSHP ADVGKFPAPG SLPVSIGGPR
201: WYIGSVSATE VEQSEDYTCI IAHGPNPKTT RIFGDCILEP CTPSVSDGDG MDAMEVKEGA ESYCGVRAFC RGNWRNQEVL AEQEDNIPAV SFSSAGSSSS
301: FNDEVVMAEM VVVAAPVDVH YPESGKPG
101: RSRLLGLGPQ ARQPFKLPQR LAKPLATQPR DCSHASSELG NVGTAAGCKP LPCSRSYGDV KSGPEVTVPG GAPPGASSHP ADVGKFPAPG SLPVSIGGPR
201: WYIGSVSATE VEQSEDYTCI IAHGPNPKTT RIFGDCILEP CTPSVSDGDG MDAMEVKEGA ESYCGVRAFC RGNWRNQEVL AEQEDNIPAV SFSSAGSSSS
301: FNDEVVMAEM VVVAAPVDVH YPESGKPG
001: MGEASDSDSS DESLKHNSTP PLFSISGFFC VAKGGDSDPG RSPTSPLDFG VFGGLFSPRS SSSSPLHRNK WLSHKVGLSL LSSSFELGDD PFRRDYIVLA
101: PQVKVNNVNT ATPKLSSDPC VIVEEPRRSS SSSPMDIIST YSRSLSGREM ALSEDYTCII SHGPNPKTTY IFGDCILDCD PKDLGKEDIE IHEEGDDSFS
201: TEKPQNHREV SAEKESENAG AEESCYEEED LFPMAMPLNP
101: PQVKVNNVNT ATPKLSSDPC VIVEEPRRSS SSSPMDIIST YSRSLSGREM ALSEDYTCII SHGPNPKTTY IFGDCILDCD PKDLGKEDIE IHEEGDDSFS
201: TEKPQNHREV SAEKESENAG AEESCYEEED LFPMAMPLNP
Arabidopsis Description
At1g79970/F19K16.7 [Source:UniProtKB/TrEMBL;Acc:Q9CA98]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.