Factsheet for TraesCS1B01G139200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
MultiLoc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G120700.1	Wheat	cytosol, extracellular, plastid	75.41	69.87
TraesCS1A01G119800.1	Wheat	plastid	68.85	63.8
HORVU1Hr1G026780.1	Barley	cytosol, extracellular, plastid	55.46	56.55
Zm00001d037713_P001	Maize	cytosol	40.98	45.73
Os05t0180500-01	Rice	cytosol	37.98	42.51
OQU77551	Sorghum	mitochondrion, plastid	39.89	39.35
TraesCS3B01G137000.1	Wheat	cytosol	32.51	33.81
GSMUA_Achr7P13270_001	Banana	nucleus	28.42	28.49
Bra008960.1-P	Field mustard	nucleus, plastid	21.31	28.36
CDX69754	Canola	nucleus, plastid	20.22	26.91
VIT_04s0008g04490.t01	Wine grape	nucleus	30.05	26.76
CDX97112	Canola	nucleus, plastid	19.95	26.64
GSMUA_AchrUn_...	Banana	nucleus	25.41	26.57
TraesCS3B01G323700.2	Wheat	cytosol	19.13	25.93
Bra000551.1-P	Field mustard	cytosol, mitochondrion	17.49	25.1
Bra007780.1-P	Field mustard	nucleus	19.95	24.66
CDX76742	Canola	nucleus	19.67	24.0
PGSC0003DMT400037607	Potato	nucleus	25.68	23.92
Solyc08g067970.2.1	Tomato	nucleus	26.5	23.89
TraesCS3B01G243000.2	Wheat	nucleus	20.49	23.81
TraesCS4B01G018400.1	Wheat	plastid	19.67	23.68
CDY11512	Canola	nucleus	19.4	23.67
KRH52543	Soybean	nucleus	26.78	23.22
CDY38508	Canola	cytosol	19.4	22.83
CDX83224	Canola	cytosol	19.95	22.39
KRH16080	Soybean	nucleus	24.32	21.92
KRH23481	Soybean	plastid	23.77	21.86
CDX85711	Canola	plastid	13.39	21.68
KRH09840	Soybean	plastid	23.5	21.66
KRH05019	Soybean	nucleus	23.22	21.3
AT2G25690.1	Thale cress	cytosol	18.85	21.3
AT5G11460.1	Thale cress	cytosol, plastid	19.95	21.22
KRH61879	Soybean	extracellular	25.41	20.99
Bra023326.1-P	Field mustard	plastid	12.84	20.61

Protein Annotations

EnsemblPlants:TraesCS1B01G139200.1	EnsemblPlantsGene:TraesCS1B01G139200	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF12
PFAM:PF04570	PFscan:PS51795	SEG:seg	MapMan:27.3.3	:	:

Description

No Description!

Coordinates

chr1B:-:182197868..182199309

Molecular Weight (calculated)

38885.3 Da

IEP (calculated)

4.409

GRAVY (calculated)

-0.416

Length

366 amino acids

Sequence
(BLAST)

001: MMLRRVVSDQ AAAGDALDGA AGGRPRGPAF FAVPRLLVGL AAAKRGTPDC DSTARSPKSP LEHRAFPALG GSLLGSPRSP RSWDSQRVGL GGLVDTLAEP
101: AADAKNRLLG FQMRPTKLQC LAKSYTSLPK DMPKDCGHAQ PELGEVEVAG AGGMSVPCTR FYGDVKSGPE VIVSSGAQLG FSNHSVDRAK FPASGSLPVS
201: IGGPRRYIGS VSAMEVEQSE DYTCIIAHGS NPKTTRIFGD CILEPCPVLM PDWESKEIDV DKEGAELYWL VKGSPDADAA EESTRFCSSC KKNLNGNESS
301: IYRGENAFCA GNCRNQAVLN EDEDEDEDED EDEDEKNPAL SSPSSASSTS QFDDDDIFID GVVVLT

Best Arabidopsis Sequence Match ( AT5G11460.1 )
(BLAST)

001: MSQHSNYQMT TASDYYSTKP VLSAIRSHKL ISSVFEGKCP SDYESAWSPT SPLDFRLFST LGNPFAASSS RSIWRGKQRS WDSGKVGLSI VHSLVDDHHT
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG

Arabidopsis Description

At5g11460 [Source:UniProtKB/TrEMBL;Acc:Q9LYE4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.