CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 2
plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037713_P001	Maize	cytosol	47.98	54.27
Os05t0180500-01	Rice	cytosol	45.01	51.07
TraesCS1B01G139200.1	Wheat	plastid	39.35	39.89
TraesCS1A01G119800.1	Wheat	plastid	42.05	39.49
HORVU1Hr1G026780.1	Barley	cytosol, extracellular, plastid	36.93	38.16
EES00181	Sorghum	cytosol, extracellular, nucleus	27.49	35.92
TraesCS1D01G120700.1	Wheat	cytosol, extracellular, plastid	37.74	35.44
GSMUA_AchrUn_...	Banana	nucleus	29.92	31.71
GSMUA_Achr7P13270_001	Banana	nucleus	28.57	29.04
Bra008960.1-P	Field mustard	nucleus, plastid	20.75	28.0
EES00998	Sorghum	cytosol, plastid	19.95	27.31
Bra000551.1-P	Field mustard	cytosol, mitochondrion	18.6	27.06
CDX97112	Canola	nucleus, plastid	19.95	27.01
CDX69754	Canola	nucleus, plastid	19.41	26.18
VIT_04s0008g04490.t01	Wine grape	nucleus	28.3	25.55
CDX83224	Canola	cytosol	22.37	25.46
EER91113	Sorghum	mitochondrion	21.29	25.16
CDY38508	Canola	cytosol	21.02	25.08
Bra007780.1-P	Field mustard	nucleus	19.41	24.32
AT2G25690.1	Thale cress	cytosol	21.02	24.07
EES01375	Sorghum	plastid	16.98	23.95
EER94230	Sorghum	cytosol, endoplasmic reticulum, nucleus	17.79	23.49
PGSC0003DMT400037607	Potato	nucleus	24.8	23.41
CDX76742	Canola	nucleus	18.87	23.33
CDY11512	Canola	nucleus	18.6	23.0
Bra023326.1-P	Field mustard	plastid	14.02	22.81
Solyc08g067970.2.1	Tomato	nucleus	24.8	22.66
CDX85711	Canola	plastid	13.75	22.57
KRH23481	Soybean	plastid	23.99	22.36
KRH52543	Soybean	nucleus	25.34	22.27
KRH05019	Soybean	nucleus	23.72	22.06
KRH09840	Soybean	plastid	23.45	21.91
KRH61879	Soybean	extracellular	25.61	21.44
KRH16080	Soybean	nucleus	23.45	21.43
AT5G11460.1	Thale cress	cytosol, plastid	19.41	20.93

Protein Annotations

EnsemblPlants:OQU77551	EnsemblPlantsGene:SORBI_3009G066500	EntrezGene:8072730	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059
PANTHER:PTHR33059:SF12	PFAM:PF04570	PFscan:PS51795	ProteinID:EES19146.1	ProteinID:OQU77551	ProteinID:OQU77551.1
RefSeq:XP_002440716.1	SEG:seg	UniParc:UPI0001A886AB	UniProt:C5Z187	MapMan:27.3.3	:

Description

hypothetical protein

Coordinates

chr9:-:7284711..7286852

Molecular Weight (calculated)

38152.0 Da

IEP (calculated)

5.248

GRAVY (calculated)

-0.181

Length

371 amino acids

Sequence
(BLAST)

001: MLLRRVAAAD DGSGAGVGRP RLFAVPRLLV GLGAGAPRCG GATPDCDSPT AARSPTSPLD LRPPFAALGG GGGGSLLRSP RSPRARSWDS HRLGLGGLVD
101: DALALAEPAG GGASRNPLLG LGAAQARQQP FKLLPQCLAT RPRDCAHASP VLGNVGTAVA SYKPVPCSRS YGDVKSGPEG VTVPGAAAPP GASSHPADLG
201: KFPAAGSLPA SIGGGPRRYV GSVSATEVEQ SEDYTCIIAH GPNPKTTRIF GDCILEPCTL GDGVDAMEVK EGAESYWLVK CFDDGEPGEE FLSSCVSCKK
301: KLDGNDSCIY RGEKAFCSRN CRDQEVLTEE EENITTTVSP LSSAGSSSSF NDDIFMAEMV VLAAPVDVHY P

Best Arabidopsis Sequence Match ( AT5G11460.1 )
(BLAST)

001: MSQHSNYQMT TASDYYSTKP VLSAIRSHKL ISSVFEGKCP SDYESAWSPT SPLDFRLFST LGNPFAASSS RSIWRGKQRS WDSGKVGLSI VHSLVDDHHT
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG

Arabidopsis Description

At5g11460 [Source:UniProtKB/TrEMBL;Acc:Q9LYE4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.