CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044365_P001	Maize	cytosol	78.6	80.68
Os01t0593200-01	Rice	nucleus	69.74	72.69
TraesCS3D01G215200.1	Wheat	nucleus	67.9	67.4
TraesCS3A01G212800.1	Wheat	nucleus	66.42	66.18
HORVU3Hr1G051540.1	Barley	cytosol	66.42	65.93
TraesCS3B01G243000.2	Wheat	nucleus	74.17	63.81
EES01375	Sorghum	plastid	29.52	30.42
CDX69754	Canola	nucleus, plastid	26.94	26.55
Bra008960.1-P	Field mustard	nucleus, plastid	26.57	26.18
CDX97112	Canola	nucleus, plastid	25.83	25.55
Bra007780.1-P	Field mustard	nucleus	27.68	25.34
Bra000551.1-P	Field mustard	cytosol, mitochondrion	23.62	25.1
CDY11512	Canola	nucleus	27.31	24.67
CDX76742	Canola	nucleus	26.94	24.33
CDY38508	Canola	cytosol	26.94	23.47
AT2G25690.1	Thale cress	cytosol	27.68	23.15
CDX85711	Canola	plastid	19.19	23.01
EER91113	Sorghum	mitochondrion	26.2	22.61
AT5G11460.1	Thale cress	cytosol, plastid	28.04	22.09
CDX83224	Canola	cytosol	26.57	22.09
KRH52543	Soybean	nucleus	34.32	22.04
Bra023326.1-P	Field mustard	plastid	18.45	21.93
VIT_04s0008g04490.t01	Wine grape	nucleus	32.84	21.65
PGSC0003DMT400037607	Potato	nucleus	31.37	21.63
EER94230	Sorghum	cytosol, endoplasmic reticulum, nucleus	22.14	21.35
EES00181	Sorghum	cytosol, extracellular, nucleus	22.14	21.13
Solyc08g067970.2.1	Tomato	nucleus	31.0	20.69
KRH16080	Soybean	nucleus	29.89	19.95
OQU77551	Sorghum	mitochondrion, plastid	27.31	19.95
KRH05019	Soybean	nucleus	29.15	19.8
KRH61879	Soybean	extracellular	31.73	19.41
KRH23481	Soybean	plastid	27.31	18.59
GSMUA_Achr7P09810_001	Banana	mitochondrion	28.41	18.55
KRH09840	Soybean	plastid	26.94	18.39
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	21.4	17.42

Protein Annotations

EnsemblPlants:EES00998	EnsemblPlantsGene:SORBI_3003G205300	EntrezGene:8082180	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059
PANTHER:PTHR33059:SF18	PFAM:PF04570	PFscan:PS51795	ProteinID:EES00998	ProteinID:EES00998.1	RefSeq:XP_002455878.1
SEG:seg	unigene:Sbi.9848	UniParc:UPI0001A84988	UniProt:C5XPK6	MapMan:27.3.3	:

Description

hypothetical protein

Coordinates

chr3:+:53558499..53561012

Molecular Weight (calculated)

29623.3 Da

IEP (calculated)

4.543

GRAVY (calculated)

-0.354

Length

271 amino acids

Sequence
(BLAST)

001: MANDSSALQA SSESIAQKMG FFRVPDLLVK LSAKCLSELD VVRSPTSPLD LKFFTGLGNK SPRSSSLDAS QNQKILLGDR VGLGLVDALT DENPVPLGGR
101: KVLLGSEMRI TDNMSRKNSS TAPGQAGEVE QKDDNMSDGL MGSVMSLDDI VNSEDYTCVV SRGPNPRTTH IFGDLVLEFQ AEQLMPVESK GDQSMSLHVK
201: EGAMSFCCFC SEKLKEGKDI YIYQGDKSFC SMECRENFMV DEMEEGEPII YHPASPRSPP SDGGRIFQLI R

Best Arabidopsis Sequence Match ( AT2G25690.2 )
(BLAST)

001: MLKTRAMFPH KDQAMSLSLD PQSDLVVGHT NNRPITNPLA LSLLIGLNNK NKCISDSDFV RSPKSPLEFR VLSTMADSFF LRSPRSSLTA HLNCCCGPAA
101: KVGLSIVDSL GDDRCLLPDI VFGPALRIKC SEVMDKHPKL LFPVANKSKK IENERSGVVF EIGDNSSETE PVGLRNRSFS ANDCLRKTRV LSRSKLGQEG
201: DFPGSGSDNA FSSEDDMEDY TCIIAHGPNP KTTHIYGDRV LECHKNELKG DEDNKEKFGS VFPSDNFLGI CNFCNKKLGG GDDIYMYREK SFCSEECRSE
301: EMMIDEEDLE EPCIDMHESL KKLF

Arabidopsis Description

At2g25690 [Source:UniProtKB/TrEMBL;Acc:Q9SL94]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.