Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES00998 | Sorghum | cytosol, plastid | 72.69 | 69.74 |
| TraesCS3D01G215200.1 | Wheat | nucleus | 67.69 | 64.47 |
| TraesCS3A01G212800.1 | Wheat | nucleus | 66.54 | 63.6 |
| HORVU3Hr1G051540.1 | Barley | cytosol | 66.54 | 63.37 |
| Zm00001d044365_P001 | Maize | cytosol | 63.85 | 62.88 |
| TraesCS3B01G243000.2 | Wheat | nucleus | 75.0 | 61.9 |
| Os01t0719000-01 | Rice | cytosol | 31.15 | 30.92 |
| Os01t0180400-01 | Rice | cytosol | 20.77 | 28.72 |
| Bra000551.1-P | Field mustard | cytosol, mitochondrion | 26.92 | 27.45 |
| Bra008960.1-P | Field mustard | nucleus, plastid | 27.69 | 26.18 |
| CDX69754 | Canola | nucleus, plastid | 27.69 | 26.18 |
| Bra007780.1-P | Field mustard | nucleus | 29.62 | 26.01 |
| CDX85711 | Canola | plastid | 22.31 | 25.66 |
| CDX97112 | Canola | nucleus, plastid | 26.92 | 25.55 |
| CDY11512 | Canola | nucleus | 29.23 | 25.33 |
| CDX76742 | Canola | nucleus | 29.23 | 25.33 |
| CDY38508 | Canola | cytosol | 29.23 | 24.44 |
| Bra023326.1-P | Field mustard | plastid | 21.15 | 24.12 |
| Os03t0665200-01 | Rice | nucleus | 27.69 | 23.84 |
| AT2G25690.1 | Thale cress | cytosol | 28.85 | 23.15 |
| KRH52543 | Soybean | nucleus | 37.31 | 22.99 |
| CDX83224 | Canola | cytosol | 28.46 | 22.7 |
| AT5G11460.1 | Thale cress | cytosol, plastid | 30.0 | 22.67 |
| Os05t0180500-01 | Rice | cytosol | 28.08 | 22.32 |
| VIT_04s0008g04490.t01 | Wine grape | nucleus | 34.23 | 21.65 |
| PGSC0003DMT400037607 | Potato | nucleus | 32.31 | 21.37 |
| Solyc08g067970.2.1 | Tomato | nucleus | 32.31 | 20.69 |
| KRH61879 | Soybean | extracellular | 34.62 | 20.32 |
| KRH16080 | Soybean | nucleus | 31.15 | 19.95 |
| KRH05019 | Soybean | nucleus | 30.38 | 19.8 |
| Os10t0422600-01 | Rice | endoplasmic reticulum | 25.77 | 19.42 |
| KRH23481 | Soybean | plastid | 28.46 | 18.59 |
| KRH09840 | Soybean | plastid | 28.08 | 18.39 |
| GSMUA_Achr7P09810_001 | Banana | mitochondrion | 28.08 | 17.59 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 20.38 | 15.92 |
Protein Annotations
| EMBL:AK103711 | EnsemblPlants:Os01t0593200-01 | EnsemblPlantsGene:Os01g0593200 | EntrezGene:4326381 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom |
| PANTHER:PTHR33059 | PANTHER:PTHR33059:SF18 | PFAM:PF04570 | PFscan:PS51795 | ProteinID:BAD52711.1 | ProteinID:BAD52894.1 |
| ProteinID:BAF05373.1 | ProteinID:BAS72964.1 | ProteinID:EAZ12541.1 | RefSeq:XP_015620828.1 | RefSeq:XP_015620862.1 | SEG:seg |
| UniParc:UPI0000446B0B | UniProt:Q5ZC42 | MapMan:27.3.3 | : | : | : |
Description
Protein of unknown function DUF581 family protein. (Os01t0593200-01)
Coordinates
chr1:+:23224373..23226605
Molecular Weight (calculated)
28595.7 Da
IEP (calculated)
4.072
GRAVY (calculated)
-0.312
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAESSLVPQ TSSESIAQKM GFFRVPDLLV KLSSKCLIEL DAVRSPTSPL DLIFFPGLGA KSPRSSFLGD RVGLGLVDSL TDDSSTPLGS RKVLLGSEMR
101: ITDNVTSKNS FTAPVEAGVV DQKDESMCDD LKGSFMSLDD IVNSEDYTRV VCRGPNPRTT HFFGDHVLEF EGEQLMPDES KSEESLPPRL EEGMMSFCYF
201: CGEKLEEGKD IYVYQGDKAF CSMECRENFM EDEMEEGEPD LSAPPSSPVA NDGCIFQLIQ
101: ITDNVTSKNS FTAPVEAGVV DQKDESMCDD LKGSFMSLDD IVNSEDYTRV VCRGPNPRTT HFFGDHVLEF EGEQLMPDES KSEESLPPRL EEGMMSFCYF
201: CGEKLEEGKD IYVYQGDKAF CSMECRENFM EDEMEEGEPD LSAPPSSPVA NDGCIFQLIQ
001: MSQHSNYQMT TASDYYSTKP VLSAIRSHKL ISSVFEGKCP SDYESAWSPT SPLDFRLFST LGNPFAASSS RSIWRGKQRS WDSGKVGLSI VHSLVDDHHT
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG
Arabidopsis Description
At5g11460 [Source:UniProtKB/TrEMBL;Acc:Q9LYE4]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.