Factsheet for TraesCS3D01G215200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
plastid 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G212800.1	Wheat	nucleus	97.07	97.43
HORVU3Hr1G051540.1	Barley	cytosol	95.24	95.24
TraesCS3B01G243000.2	Wheat	nucleus	83.52	72.38
EES00998	Sorghum	cytosol, plastid	67.4	67.9
Os01t0593200-01	Rice	nucleus	64.47	67.69
Zm00001d044365_P001	Maize	cytosol	60.81	62.88
Bra000551.1-P	Field mustard	cytosol, mitochondrion	25.27	27.06
Bra008960.1-P	Field mustard	nucleus, plastid	26.01	25.82
CDX69754	Canola	nucleus, plastid	26.01	25.82
Bra007780.1-P	Field mustard	nucleus	27.47	25.34
CDX97112	Canola	nucleus, plastid	24.54	24.45
TraesCS3D01G288800.1	Wheat	cytosol	23.81	24.16
TraesCS4D01G016600.1	Wheat	mitochondrion	24.54	23.93
CDX76742	Canola	nucleus	26.01	23.67
CDY38508	Canola	cytosol	26.74	23.47
CDY11512	Canola	nucleus	25.64	23.33
CDX85711	Canola	plastid	19.05	23.01
CDX83224	Canola	cytosol	27.11	22.7
TraesCS3D01G119500.1	Wheat	cytosol	29.3	22.41
PGSC0003DMT400037607	Potato	nucleus	31.87	22.14
Bra023326.1-P	Field mustard	plastid	18.32	21.93
AT2G25690.1	Thale cress	cytosol	26.01	21.91
KRH52543	Soybean	nucleus	33.7	21.8
Solyc08g067970.2.1	Tomato	nucleus	31.5	21.18
AT5G11460.1	Thale cress	cytosol, plastid	26.37	20.93
VIT_04s0008g04490.t01	Wine grape	nucleus	30.77	20.44
KRH61879	Soybean	extracellular	31.87	19.64
GSMUA_Achr7P09810_001	Banana	mitochondrion	29.3	19.28
KRH23481	Soybean	plastid	27.47	18.84
KRH16080	Soybean	nucleus	27.84	18.72
KRH09840	Soybean	plastid	27.11	18.64
KRH05019	Soybean	nucleus	27.11	18.55
TraesCS1D01G120700.1	Wheat	cytosol, extracellular, plastid	24.54	16.96
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	18.68	15.32

Protein Annotations

EnsemblPlants:TraesCS3D01G215200.1	EnsemblPlantsGene:TraesCS3D01G215200	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF18
PFAM:PF04570	PFscan:PS51795	SEG:seg	MapMan:27.3.3	:	:

Description

No Description!

Coordinates

chr3D:+:291225866..291226804

Molecular Weight (calculated)

29826.1 Da

IEP (calculated)

4.455

GRAVY (calculated)

-0.416

Length

273 amino acids

Sequence
(BLAST)

001: MAAESSVPQT SSESAAHKMG FFRVPDLLVK LSTKCLIELD AVRSPTSPLD LKLFTGLATK SPRSSFLDAG AASQNQKILL GDRVGLGLVD SLSDENNPTP
101: LGSRKVLLGS EMRITDNLTR KNSSTAPNQA GLLEQKDENM SDGLNGSIMS LDDIVNSEDY TCVVTRGPNP RTTHIFGDRV FEFQAEQLIP DEGGCEESLA
201: PHLNGDTMSF CCFCGDKLKE GKDIYIYQGD KAFCSMECRE NFMEDEMEGE PSIGHSDPSG PSFDNRRIFH LIQ

Best Arabidopsis Sequence Match ( AT2G25690.2 )
(BLAST)

001: MLKTRAMFPH KDQAMSLSLD PQSDLVVGHT NNRPITNPLA LSLLIGLNNK NKCISDSDFV RSPKSPLEFR VLSTMADSFF LRSPRSSLTA HLNCCCGPAA
101: KVGLSIVDSL GDDRCLLPDI VFGPALRIKC SEVMDKHPKL LFPVANKSKK IENERSGVVF EIGDNSSETE PVGLRNRSFS ANDCLRKTRV LSRSKLGQEG
201: DFPGSGSDNA FSSEDDMEDY TCIIAHGPNP KTTHIYGDRV LECHKNELKG DEDNKEKFGS VFPSDNFLGI CNFCNKKLGG GDDIYMYREK SFCSEECRSE
301: EMMIDEEDLE EPCIDMHESL KKLF

Arabidopsis Description

At2g25690 [Source:UniProtKB/TrEMBL;Acc:Q9SL94]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.