Factsheet for TraesCS3D01G119500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G137000.1	Wheat	cytosol	91.32	92.61
TraesCS3A01G117700.1	Wheat	cytosol	88.52	89.52
Zm00001d039597_P001	Maize	cytosol	54.34	54.65
Zm00001d008782_P001	Maize	nucleus	50.98	51.56
HORVU3Hr1G021650.1	Barley	nucleus	57.42	46.59
GSMUA_AchrUn_...	Banana	nucleus	29.97	30.57
GSMUA_Achr7P13270_001	Banana	nucleus	31.09	30.41
Bra000551.1-P	Field mustard	cytosol, mitochondrion	21.29	29.8
TraesCS3D01G215200.1	Wheat	nucleus	22.41	29.3
TraesCS1D01G120700.1	Wheat	cytosol, extracellular, plastid	32.21	29.11
TraesCS4D01G016600.1	Wheat	mitochondrion	22.41	28.57
CDX97112	Canola	nucleus, plastid	21.57	28.1
Bra008960.1-P	Field mustard	nucleus, plastid	21.57	28.0
CDY38508	Canola	cytosol	24.09	27.65
Bra023326.1-P	Field mustard	plastid	17.65	27.63
CDX83224	Canola	cytosol	25.21	27.61
CDX69754	Canola	nucleus, plastid	21.01	27.27
KRH52543	Soybean	nucleus	31.09	26.3
VIT_04s0008g04490.t01	Wine grape	nucleus	30.25	26.28
Bra007780.1-P	Field mustard	nucleus	21.57	26.01
CDX76742	Canola	nucleus	21.85	26.0
CDY11512	Canola	nucleus	21.57	25.67
CDX85711	Canola	plastid	16.25	25.66
AT2G25690.1	Thale cress	cytosol	23.25	25.62
TraesCS3D01G288800.1	Wheat	cytosol	19.05	25.28
KRH05019	Soybean	nucleus	27.73	24.81
KRH16080	Soybean	nucleus	27.73	24.38
PGSC0003DMT400037607	Potato	nucleus	25.77	23.41
Solyc08g067970.2.1	Tomato	nucleus	26.61	23.4
KRH61879	Soybean	extracellular	28.57	23.02
AT5G11460.1	Thale cress	cytosol, plastid	22.13	22.97
KRH09840	Soybean	plastid	25.49	22.92
KRH23481	Soybean	plastid	25.49	22.86

Protein Annotations

EnsemblPlants:TraesCS3D01G119500.1	EnsemblPlantsGene:TraesCS3D01G119500	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF12
PFAM:PF04570	PFscan:PS51795	SEG:seg	MapMan:27.3.3	:	:

Description

No Description!

Coordinates

chr3D:-:74759394..74760797

Molecular Weight (calculated)

36619.2 Da

IEP (calculated)

6.693

GRAVY (calculated)

-0.266

Length

357 amino acids

Sequence
(BLAST)

001: MLRRMVSDQA PGSGGSGGDA RPRGGGGGGG GALFAVPRLF IGLAAAKRAP DGAGESERSP TSPLDPKALL LRSPRSPRTW DAEPVGLGLV VDVALAAGAD
101: SAAAKTCVLS PRLRLRTHGC AGSTTKGCGG GGHSQPELGG KTISCPASAT AGMSVPCSRF FHGDLKSGPE AARPDGAHSG AKRHCFHLGE LPGPGSLPAS
201: IAGGARRFFG SVSASEVEQS EDYTCIIARG PNPKTTHIFG DCILEPQTTV GKSDEAAMEP KDGASAKSYL VVKRDTEAAA GPGEDFLSSC FTCTKKLEGN
301: DIYIYRGEKA FCSAECRDQE IMIEEEAENS MAIGGSPRSS CSSLHEDIFM AGMMVAT

Best Arabidopsis Sequence Match ( AT5G11460.1 )
(BLAST)

001: MSQHSNYQMT TASDYYSTKP VLSAIRSHKL ISSVFEGKCP SDYESAWSPT SPLDFRLFST LGNPFAASSS RSIWRGKQRS WDSGKVGLSI VHSLVDDHHT
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG

Arabidopsis Description

At5g11460 [Source:UniProtKB/TrEMBL;Acc:Q9LYE4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.