Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P13270_001 | Banana | nucleus | 47.43 | 45.48 |
| Os01t0180400-01 | Rice | cytosol | 22.29 | 41.49 |
| GSMUA_Achr3P25470_001 | Banana | mitochondrion | 23.71 | 35.17 |
| GSMUA_Achr8P20380_001 | Banana | mitochondrion, nucleus | 26.29 | 32.62 |
| Bra008960.1-P | Field mustard | nucleus, plastid | 25.14 | 32.0 |
| CDX69754 | Canola | nucleus, plastid | 25.14 | 32.0 |
| VIT_04s0008g04490.t01 | Wine grape | nucleus | 37.14 | 31.63 |
| Solyc08g067970.2.1 | Tomato | nucleus | 36.57 | 31.53 |
| EES00181 | Sorghum | cytosol, extracellular, nucleus | 25.43 | 31.34 |
| Os05t0180500-01 | Rice | cytosol | 29.14 | 31.19 |
| GSMUA_Achr1P14130_001 | Banana | mitochondrion | 25.43 | 31.12 |
| GSMUA_Achr9P25720_001 | Banana | nucleus | 29.14 | 31.1 |
| Bra000551.1-P | Field mustard | cytosol, mitochondrion | 22.57 | 30.98 |
| TraesCS3A01G117700.1 | Wheat | cytosol | 31.14 | 30.88 |
| PGSC0003DMT400037607 | Potato | nucleus | 34.57 | 30.79 |
| Zm00001d039597_P001 | Maize | cytosol | 31.14 | 30.7 |
| TraesCS3B01G137000.1 | Wheat | cytosol | 30.86 | 30.68 |
| CDX97112 | Canola | nucleus, plastid | 23.71 | 30.29 |
| CDX83224 | Canola | cytosol | 28.0 | 30.06 |
| CDY11512 | Canola | nucleus | 25.71 | 30.0 |
| TraesCS3D01G119500.1 | Wheat | cytosol | 30.57 | 29.97 |
| OQU77551 | Sorghum | mitochondrion, plastid | 31.71 | 29.92 |
| CDY38508 | Canola | cytosol | 26.57 | 29.9 |
| GSMUA_Achr7P09810_001 | Banana | mitochondrion | 35.14 | 29.64 |
| AT2G25690.1 | Thale cress | cytosol | 27.43 | 29.63 |
| Bra007780.1-P | Field mustard | nucleus | 24.57 | 29.05 |
| CDX76742 | Canola | nucleus | 24.57 | 28.67 |
| Zm00001d008782_P001 | Maize | nucleus | 28.86 | 28.61 |
| Bra023326.1-P | Field mustard | plastid | 18.57 | 28.51 |
| KRH52543 | Soybean | nucleus | 34.29 | 28.44 |
| KRH05019 | Soybean | nucleus | 32.29 | 28.32 |
| GSMUA_Achr2P08850_001 | Banana | plastid | 23.43 | 27.52 |
| CDX85711 | Canola | plastid | 17.71 | 27.43 |
| Zm00001d037713_P001 | Maize | cytosol | 25.14 | 26.83 |
| KRH16080 | Soybean | nucleus | 30.29 | 26.11 |
| GSMUA_Achr4P22610_001 | Banana | nucleus | 28.0 | 26.06 |
| KRH61879 | Soybean | extracellular | 32.86 | 25.96 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 24.29 | 25.53 |
| TraesCS1B01G139200.1 | Wheat | plastid | 26.57 | 25.41 |
| GSMUA_Achr6P22030_001 | Banana | cytosol | 21.71 | 25.17 |
| KRH23481 | Soybean | plastid | 28.29 | 24.87 |
| AT5G11460.1 | Thale cress | cytosol, plastid | 24.0 | 24.42 |
| KRH09840 | Soybean | plastid | 27.43 | 24.18 |
| TraesCS1A01G119800.1 | Wheat | plastid | 27.14 | 24.05 |
| TraesCS1D01G120700.1 | Wheat | cytosol, extracellular, plastid | 26.86 | 23.8 |
| HORVU1Hr1G026780.1 | Barley | cytosol, extracellular, plastid | 24.0 | 23.4 |
| GSMUA_Achr4P21250_001 | Banana | nucleus | 23.71 | 22.62 |
| HORVU3Hr1G021650.1 | Barley | nucleus | 23.43 | 18.64 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP03850_001 | EnsemblPlants:GSMUA_AchrUn_randomT03850_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG03850_001 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 |
| PANTHER:PTHR33059:SF15 | PFAM:PF04570 | PFscan:PS51795 | SEG:seg | UniParc:UPI0002958BC9 | UniProt:M0U647 |
| MapMan:27.3.3 | : | : | : | : | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG03850_001]
Coordinates
chrchrUn_random:+:17560421..17562183
Molecular Weight (calculated)
38116.6 Da
IEP (calculated)
5.427
GRAVY (calculated)
-0.405
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRAMNKIHK DHGTEQLVSD SPSDSCFSSK GLMQTARNTS LFGVPGVFVG FSTKGFSNSD AVRSPTSPLD CKAFSGLGNS FLGSPRSASL DGKPRCWDCN
101: RVGLSLVDAL KDEAEPCGKF LGLSESRTSA FAPATRIDIS CHKSHLAGLR DDSSCAAPKS LPKDYAISSH TLDSNSSMVD SFRLVERSAS FDKFSHETIG
201: PSYGVITSLS ASEIEQSEDY TCIISHGPNP KTTHIFGDCI LESHSFPSLV FENKCRTDDC RSAWLLKPSE DSPPCSTDDF LRSCLSCKKK LEEGKDIYMY
301: KGEKAFCSSD CRDREILIEE EMEKLTIDSS GTPGSSFHED MFADGKIMTA
101: RVGLSLVDAL KDEAEPCGKF LGLSESRTSA FAPATRIDIS CHKSHLAGLR DDSSCAAPKS LPKDYAISSH TLDSNSSMVD SFRLVERSAS FDKFSHETIG
201: PSYGVITSLS ASEIEQSEDY TCIISHGPNP KTTHIFGDCI LESHSFPSLV FENKCRTDDC RSAWLLKPSE DSPPCSTDDF LRSCLSCKKK LEEGKDIYMY
301: KGEKAFCSSD CRDREILIEE EMEKLTIDSS GTPGSSFHED MFADGKIMTA
001: MSQHSNYQMT TASDYYSTKP VLSAIRSHKL ISSVFEGKCP SDYESAWSPT SPLDFRLFST LGNPFAASSS RSIWRGKQRS WDSGKVGLSI VHSLVDDHHT
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG
Arabidopsis Description
At5g11460 [Source:UniProtKB/TrEMBL;Acc:Q9LYE4]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.