Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007780.1-P | Field mustard | nucleus | 90.33 | 91.55 |
| CDY11512 | Canola | nucleus | 88.33 | 88.33 |
| CDY38508 | Canola | cytosol | 54.0 | 52.09 |
| CDX83224 | Canola | cytosol | 52.33 | 48.16 |
| AT2G25690.1 | Thale cress | cytosol | 51.67 | 47.84 |
| CDX69754 | Canola | nucleus, plastid | 29.67 | 32.36 |
| CDX97112 | Canola | nucleus, plastid | 29.0 | 31.75 |
| CDX85711 | Canola | plastid | 23.67 | 31.42 |
| CDX98213 | Canola | mitochondrion | 27.33 | 31.3 |
| CDY34246 | Canola | mitochondrion | 26.33 | 30.15 |
| CDX92948 | Canola | mitochondrion | 26.33 | 29.92 |
| CDY65610 | Canola | mitochondrion, nucleus | 26.67 | 29.85 |
| CDY24316 | Canola | mitochondrion, plastid | 21.67 | 29.82 |
| Os01t0180400-01 | Rice | cytosol | 18.67 | 29.79 |
| Os01t0593200-01 | Rice | nucleus | 25.33 | 29.23 |
| CDY56452 | Canola | plastid | 22.33 | 28.39 |
| Os01t0719000-01 | Rice | cytosol | 24.0 | 27.48 |
| CDX76690 | Canola | plastid | 21.33 | 27.35 |
| EES00998 | Sorghum | cytosol, plastid | 24.33 | 26.94 |
| Zm00001d044365_P001 | Maize | cytosol | 23.67 | 26.89 |
| TraesCS3D01G215200.1 | Wheat | nucleus | 23.67 | 26.01 |
| HORVU3Hr1G051540.1 | Barley | cytosol | 23.67 | 26.01 |
| VIT_04s0008g04490.t01 | Wine grape | nucleus | 35.33 | 25.79 |
| CDX93919 | Canola | nucleus | 20.33 | 25.52 |
| TraesCS3A01G212800.1 | Wheat | nucleus | 23.0 | 25.37 |
| PGSC0003DMT400037607 | Potato | nucleus | 33.0 | 25.19 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.67 | 24.57 |
| HORVU3Hr1G068120.1 | Barley | cytosol | 21.0 | 24.23 |
| TraesCS3B01G243000.2 | Wheat | nucleus | 25.33 | 24.13 |
| TraesCS3B01G323700.2 | Wheat | cytosol | 21.67 | 24.07 |
| KRH05019 | Soybean | nucleus | 32.0 | 24.06 |
| Solyc08g067970.2.1 | Tomato | nucleus | 32.0 | 23.65 |
| TraesCS3A01G289000.1 | Wheat | cytosol | 21.33 | 23.62 |
| EES00181 | Sorghum | cytosol, extracellular, nucleus | 22.33 | 23.59 |
| CDX67936 | Canola | nucleus, plastid | 20.0 | 23.53 |
| TraesCS3D01G288800.1 | Wheat | cytosol | 21.0 | 23.42 |
| EES01375 | Sorghum | plastid | 20.33 | 23.19 |
| GSMUA_Achr7P13270_001 | Banana | nucleus | 27.33 | 22.47 |
| TraesCS3B01G137000.1 | Wheat | cytosol | 26.33 | 22.44 |
| TraesCS3A01G117700.1 | Wheat | cytosol | 26.33 | 22.38 |
| Zm00001d008782_P001 | Maize | nucleus | 26.0 | 22.1 |
| KRH52543 | Soybean | nucleus | 31.0 | 22.04 |
| Os05t0180500-01 | Rice | cytosol | 24.0 | 22.02 |
| TraesCS3D01G119500.1 | Wheat | cytosol | 26.0 | 21.85 |
| Zm00001d039597_P001 | Maize | cytosol | 25.67 | 21.69 |
| KRH16080 | Soybean | nucleus | 29.33 | 21.67 |
| KRH61879 | Soybean | extracellular | 31.67 | 21.44 |
| CDX79402 | Canola | nucleus, plastid | 19.67 | 21.22 |
| Zm00001d043612_P002 | Maize | plastid | 16.67 | 19.68 |
| TraesCS1B01G139200.1 | Wheat | plastid | 24.0 | 19.67 |
| HORVU1Hr1G026780.1 | Barley | cytosol, extracellular, plastid | 23.33 | 19.5 |
| Zm00001d037713_P001 | Maize | cytosol | 21.0 | 19.21 |
| OQU77551 | Sorghum | mitochondrion, plastid | 23.33 | 18.87 |
| TraesCS1D01G120700.1 | Wheat | cytosol, extracellular, plastid | 23.67 | 17.97 |
| GSMUA_Achr7P09810_001 | Banana | mitochondrion | 24.67 | 17.83 |
| CDY53722 | Canola | extracellular, vacuole | 21.0 | 17.21 |
| TraesCS1A01G119800.1 | Wheat | plastid | 22.33 | 16.96 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 17.33 | 15.62 |
| HORVU3Hr1G021650.1 | Barley | nucleus | 22.0 | 15.0 |
Protein Annotations
| EnsemblPlants:CDX76742 | EnsemblPlantsGene:GSBRNA2T00127231001 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF15 |
| PFAM:PF04570 | PFscan:PS51795 | ProteinID:CDX76742 | ProteinID:CDX76742.1 | SEG:seg | UniParc:UPI0004EE036F |
| MapMan:27.3.3 | : | : | : | : | : |
Description
BnaC08g33280D
Coordinates
chrLK031808:+:790258..791599
Molecular Weight (calculated)
33573.8 Da
IEP (calculated)
6.105
GRAVY (calculated)
-0.514
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MQKTRATFRH KDQTMSQSVD RQTDLVGHNN NNNNKVITNP LAMSLLIGLK NDKCISDSDF VRSPKSPLEF KMLSTMAADP FFLRSPRSSF TAHLNCPAKV
101: GLSIVDSLGD DRALSPDVVF GPALRIKSSD IKDKHPKSLK IEKERSGVIF EIGSFSADDC PTKTRVLSQS KFPRIGSDNA FSSEDEMEMS EDYTCITTHG
201: PNPKTTHIYG DQVLECHKNG DDNKDKSIET ELDSMFTLDN FLSVCNLCNK KLVLGKDIYM YRGEKAFCSA ECRSEEMTID EEDVQDSCVV MHGSLKKLLF
101: GLSIVDSLGD DRALSPDVVF GPALRIKSSD IKDKHPKSLK IEKERSGVIF EIGSFSADDC PTKTRVLSQS KFPRIGSDNA FSSEDEMEMS EDYTCITTHG
201: PNPKTTHIYG DQVLECHKNG DDNKDKSIET ELDSMFTLDN FLSVCNLCNK KLVLGKDIYM YRGEKAFCSA ECRSEEMTID EEDVQDSCVV MHGSLKKLLF
001: MLKTRAMFPH KDQAMSLSLD PQSDLVVGHT NNRPITNPLA LSLLIGLNNK NKCISDSDFV RSPKSPLEFR VLSTMADSFF LRSPRSSLTA HLNCCCGPAA
101: KVGLSIVDSL GDDRCLLPDI VFGPALRIKC SEVMDKHPKL LFPVANKSKK IENERSGVVF EIGDNSSETE PVGLRNRSFS ANDCLRKTRV LSRSKLGQEG
201: DFPGSGSDNA FSSEDDMEDY TCIIAHGPNP KTTHIYGDRV LECHKNELKG DEDNKEKFGS VFPSDNFLGI CNFCNKKLGG GDDIYMYREK SFCSEECRSE
301: EMMIDEEDLE EPCIDMHESL KKLF
101: KVGLSIVDSL GDDRCLLPDI VFGPALRIKC SEVMDKHPKL LFPVANKSKK IENERSGVVF EIGDNSSETE PVGLRNRSFS ANDCLRKTRV LSRSKLGQEG
201: DFPGSGSDNA FSSEDDMEDY TCIIAHGPNP KTTHIYGDRV LECHKNELKG DEDNKEKFGS VFPSDNFLGI CNFCNKKLGG GDDIYMYREK SFCSEECRSE
301: EMMIDEEDLE EPCIDMHESL KKLF
Arabidopsis Description
At2g25690 [Source:UniProtKB/TrEMBL;Acc:Q9SL94]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.