Factsheet for TraesCS3B01G243000.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
plastid 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G215200.1	Wheat	nucleus	72.38	83.52
TraesCS3A01G212800.1	Wheat	nucleus	71.75	83.09
HORVU3Hr1G051540.1	Barley	cytosol	70.79	81.69
Os01t0593200-01	Rice	nucleus	61.9	75.0
EES00998	Sorghum	cytosol, plastid	63.81	74.17
Zm00001d044365_P001	Maize	cytosol	55.56	66.29
TraesCS3B01G323700.2	Wheat	cytosol	23.49	27.41
CDX69754	Canola	nucleus, plastid	23.81	27.27
Bra008960.1-P	Field mustard	nucleus, plastid	23.49	26.91
Bra007780.1-P	Field mustard	nucleus	25.08	26.69
Bra000551.1-P	Field mustard	cytosol, mitochondrion	21.59	26.67
CDX97112	Canola	nucleus, plastid	23.17	26.64
CDX76742	Canola	nucleus	24.13	25.33
CDY11512	Canola	nucleus	23.49	24.67
CDX85711	Canola	plastid	17.46	24.34
TraesCS3B01G137000.1	Wheat	cytosol	26.98	24.15
CDY38508	Canola	cytosol	23.49	23.79
AT2G25690.1	Thale cress	cytosol	24.44	23.77
CDX83224	Canola	cytosol	23.81	23.01
Bra023326.1-P	Field mustard	plastid	16.51	22.81
PGSC0003DMT400037607	Potato	nucleus	28.25	22.65
VIT_04s0008g04490.t01	Wine grape	nucleus	29.21	22.38
AT5G11460.1	Thale cress	cytosol, plastid	24.13	22.09
KRH52543	Soybean	nucleus	29.52	22.04
Solyc08g067970.2.1	Tomato	nucleus	28.25	21.92
TraesCS4B01G018400.1	Wheat	plastid	20.95	21.71
TraesCS1B01G139200.1	Wheat	plastid	23.81	20.49
GSMUA_Achr7P09810_001	Banana	mitochondrion	26.67	20.24
KRH61879	Soybean	extracellular	28.25	20.09
KRH16080	Soybean	nucleus	25.4	19.7
KRH23481	Soybean	plastid	24.44	19.35
KRH05019	Soybean	nucleus	24.44	19.3
KRH09840	Soybean	plastid	24.13	19.14
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	17.46	16.52

Protein Annotations

EnsemblPlants:TraesCS3B01G243000.2	EnsemblPlantsGene:TraesCS3B01G243000	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF18
PFAM:PF04570	PFscan:PS51795	SEG:seg	MapMan:27.3.3	:	:

Description

No Description!

Coordinates

chr3B:+:384310659..384312375

Molecular Weight (calculated)

34530.7 Da

IEP (calculated)

4.477

GRAVY (calculated)

-0.426

Length

315 amino acids

Sequence
(BLAST)

001: MPSTASPIEI CRFFFSSRGS RCRCEETKQS PEARTVVKQS DQMAAESSVP QTSSESAAHK MGFFRVPDLL VKLSTKCLIE LDAVRSPTSP LDLKLFTGLA
101: TRSPRSSFLD AGAASQNQKI LLGDRVGLGL VDSLSDENNP TPLGSRKVLL GSEMRITDNL TLKNSSTAPN QAGLLEQKDE NMSDGLNGSI MSLDDIVNSE
201: DYTCVVTRGP NPRTTHIFGD RVFEFQAEQL MPDEGGCEES LAPHLNGDTM SFCCFCGDKL KEGKDIYIYQ GDKAFCSMEC RENFMEDEME GEPSIGHSDP
301: SGPSFDNRCI FQLIQ

Best Arabidopsis Sequence Match ( AT2G25690.2 )
(BLAST)

001: MLKTRAMFPH KDQAMSLSLD PQSDLVVGHT NNRPITNPLA LSLLIGLNNK NKCISDSDFV RSPKSPLEFR VLSTMADSFF LRSPRSSLTA HLNCCCGPAA
101: KVGLSIVDSL GDDRCLLPDI VFGPALRIKC SEVMDKHPKL LFPVANKSKK IENERSGVVF EIGDNSSETE PVGLRNRSFS ANDCLRKTRV LSRSKLGQEG
201: DFPGSGSDNA FSSEDDMEDY TCIIAHGPNP KTTHIYGDRV LECHKNELKG DEDNKEKFGS VFPSDNFLGI CNFCNKKLGG GDDIYMYREK SFCSEECRSE
301: EMMIDEEDLE EPCIDMHESL KKLF

Arabidopsis Description

At2g25690 [Source:UniProtKB/TrEMBL;Acc:Q9SL94]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.