Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83224 | Canola | cytosol | 59.57 | 59.2 |
| CDY11512 | Canola | nucleus | 51.23 | 55.33 |
| CDY38508 | Canola | cytosol | 51.23 | 53.38 |
| Bra000551.1-P | Field mustard | cytosol, mitochondrion | 41.67 | 52.94 |
| Bra007780.1-P | Field mustard | nucleus | 48.15 | 52.7 |
| CDX76742 | Canola | nucleus | 47.84 | 51.67 |
| Os01t0593200-01 | Rice | nucleus | 23.15 | 28.85 |
| AT3G22550.1 | Thale cress | mitochondrion | 23.77 | 28.84 |
| EES00998 | Sorghum | cytosol, plastid | 23.15 | 27.68 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.63 | 27.43 |
| Zm00001d044365_P001 | Maize | cytosol | 22.22 | 27.27 |
| Solyc08g067970.2.1 | Tomato | nucleus | 33.64 | 26.85 |
| Os01t0180400-01 | Rice | cytosol | 15.43 | 26.6 |
| VIT_04s0008g04490.t01 | Wine grape | nucleus | 33.33 | 26.28 |
| PGSC0003DMT400037607 | Potato | nucleus | 31.79 | 26.21 |
| TraesCS3D01G215200.1 | Wheat | nucleus | 21.91 | 26.01 |
| AT5G11460.1 | Thale cress | cytosol, plastid | 27.47 | 25.87 |
| TraesCS3A01G212800.1 | Wheat | nucleus | 21.6 | 25.74 |
| Os01t0719000-01 | Rice | cytosol | 20.68 | 25.57 |
| HORVU3Hr1G051540.1 | Barley | cytosol | 21.3 | 25.27 |
| TraesCS3B01G243000.2 | Wheat | nucleus | 23.77 | 24.44 |
| GSMUA_Achr7P13270_001 | Banana | nucleus | 27.47 | 24.38 |
| KRH05019 | Soybean | nucleus | 29.63 | 24.06 |
| TraesCS3B01G137000.1 | Wheat | cytosol | 25.93 | 23.86 |
| EES01375 | Sorghum | plastid | 19.14 | 23.57 |
| HORVU3Hr1G068120.1 | Barley | cytosol | 18.83 | 23.46 |
| TraesCS3D01G119500.1 | Wheat | cytosol | 25.62 | 23.25 |
| TraesCS3A01G289000.1 | Wheat | cytosol | 19.44 | 23.25 |
| AT3G63210.1 | Thale cress | mitochondrion, plastid | 18.83 | 23.19 |
| TraesCS3D01G288800.1 | Wheat | cytosol | 19.14 | 23.05 |
| TraesCS3B01G323700.2 | Wheat | cytosol | 19.14 | 22.96 |
| TraesCS3A01G117700.1 | Wheat | cytosol | 25.0 | 22.95 |
| EES00181 | Sorghum | cytosol, extracellular, nucleus | 19.75 | 22.54 |
| Zm00001d008782_P001 | Maize | nucleus | 24.07 | 22.1 |
| KRH52543 | Soybean | nucleus | 28.7 | 22.04 |
| Os05t0180500-01 | Rice | cytosol | 22.22 | 22.02 |
| KRH61879 | Soybean | extracellular | 29.32 | 21.44 |
| OQU77551 | Sorghum | mitochondrion, plastid | 24.07 | 21.02 |
| KRH16080 | Soybean | nucleus | 26.23 | 20.94 |
| AT1G79970.1 | Thale cress | nucleus, plastid | 15.43 | 20.83 |
| Zm00001d039597_P001 | Maize | cytosol | 22.53 | 20.56 |
| Zm00001d043612_P002 | Maize | plastid | 16.05 | 20.47 |
| Zm00001d037713_P001 | Maize | cytosol | 19.75 | 19.51 |
| TraesCS1B01G139200.1 | Wheat | plastid | 21.3 | 18.85 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 18.83 | 18.32 |
| HORVU1Hr1G026780.1 | Barley | cytosol, extracellular, plastid | 20.06 | 18.11 |
| GSMUA_Achr7P09810_001 | Banana | mitochondrion | 23.15 | 18.07 |
| TraesCS1D01G120700.1 | Wheat | cytosol, extracellular, plastid | 20.99 | 17.22 |
| TraesCS1A01G119800.1 | Wheat | plastid | 20.99 | 17.22 |
| HORVU3Hr1G021650.1 | Barley | nucleus | 20.99 | 15.45 |
Protein Annotations
| MapMan:27.3.3 | EntrezGene:817110 | ProteinID:AAD31369.1 | ProteinID:AEC07736.1 | ProteinID:AEC07737.1 | EMBL:AK175432 |
| ArrayExpress:AT2G25690 | EnsemblPlantsGene:AT2G25690 | RefSeq:AT2G25690 | TAIR:AT2G25690 | RefSeq:AT2G25690-TAIR-G | EnsemblPlants:AT2G25690.1 |
| TAIR:AT2G25690.1 | Unigene:At.38987 | EMBL:BT010878 | GO:GO:0008150 | InterPro:IPR007650 | RefSeq:NP_001031415.1 |
| RefSeq:NP_180140.1 | PFAM:PF04570 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS51795 | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF15 | UniProt:Q9SL94 | UniParc:UPI00000A6F17 |
| InterPro:Zf-FLZ_dom | SEG:seg | : | : | : | : |
Description
At2g25690 [Source:UniProtKB/TrEMBL;Acc:Q9SL94]
Coordinates
chr2:-:10940071..10942454
Molecular Weight (calculated)
36093.9 Da
IEP (calculated)
5.299
GRAVY (calculated)
-0.471
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKTRAMFPH KDQAMSLSLD PQSDLVVGHT NNRPITNPLA LSLLIGLNNK NKCISDSDFV RSPKSPLEFR VLSTMADSFF LRSPRSSLTA HLNCCCGPAA
101: KVGLSIVDSL GDDRCLLPDI VFGPALRIKC SEVMDKHPKL LFPVANKSKK IENERSGVVF EIGDNSSETE PVGLRNRSFS ANDCLRKTRV LSRSKLGQEG
201: DFPGSGSDNA FSSEDDMEDY TCIIAHGPNP KTTHIYGDRV LECHKNELKG DEDNKEKFGS VFPSDNFLGI CNFCNKKLGG GDDIYMYREK SFCSEECRSE
301: EMMIDEEDLE EPCIDMHESL KKLF
101: KVGLSIVDSL GDDRCLLPDI VFGPALRIKC SEVMDKHPKL LFPVANKSKK IENERSGVVF EIGDNSSETE PVGLRNRSFS ANDCLRKTRV LSRSKLGQEG
201: DFPGSGSDNA FSSEDDMEDY TCIIAHGPNP KTTHIYGDRV LECHKNELKG DEDNKEKFGS VFPSDNFLGI CNFCNKKLGG GDDIYMYREK SFCSEECRSE
301: EMMIDEEDLE EPCIDMHESL KKLF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.