Factsheet for HORVU3Hr1G068120.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G288800.1	Wheat	cytosol	77.31	74.72
TraesCS3B01G323700.2	Wheat	cytosol	77.31	74.44
TraesCS3A01G289000.1	Wheat	cytosol	76.54	73.43
Os01t0719000-01	Rice	cytosol	50.0	49.62
Zm00001d043612_P002	Maize	plastid	40.77	41.73
EES01375	Sorghum	plastid	40.0	39.54
HORVU3Hr1G051540.1	Barley	cytosol	28.85	27.47
Bra023326.1-P	Field mustard	plastid	20.77	23.68
CDX85711	Canola	plastid	20.0	23.01
CDY11512	Canola	nucleus	25.77	22.33
Bra007780.1-P	Field mustard	nucleus	25.0	21.96
CDX97112	Canola	nucleus, plastid	23.08	21.9
Bra008960.1-P	Field mustard	nucleus, plastid	22.69	21.45
Bra000551.1-P	Field mustard	cytosol, mitochondrion	20.77	21.18
CDX76742	Canola	nucleus	24.23	21.0
CDX69754	Canola	nucleus, plastid	21.92	20.73
CDY38508	Canola	cytosol	23.85	19.94
AT2G25690.1	Thale cress	cytosol	23.46	18.83
CDX83224	Canola	cytosol	23.46	18.71
AT5G11460.1	Thale cress	cytosol, plastid	24.23	18.31
HORVU1Hr1G026780.1	Barley	cytosol, extracellular, plastid	23.85	17.27
PGSC0003DMT400037607	Potato	nucleus	24.62	16.29
KRH05019	Soybean	nucleus	24.23	15.79
KRH52543	Soybean	nucleus	25.38	15.64
KRH16080	Soybean	nucleus	24.23	15.52
Solyc08g067970.2.1	Tomato	nucleus	24.23	15.52
VIT_04s0008g04490.t01	Wine grape	nucleus	23.85	15.09
KRH09840	Soybean	plastid	22.69	14.86
KRH23481	Soybean	plastid	22.31	14.57
KRH61879	Soybean	extracellular	24.23	14.22
GSMUA_Achr7P09810_001	Banana	mitochondrion	22.69	14.22
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	15.38	12.01
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	19.62	11.67
HORVU3Hr1G021650.1	Barley	nucleus	19.62	11.59
HORVU3Hr1G018540.1	Barley	extracellular	4.23	8.46

Protein Annotations

EnsemblPlants:HORVU3Hr1G068120.1	EnsemblPlantsGene:HORVU3Hr1G068120	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF13
PFAM:PF04570	PFscan:PS51795	UniParc:UPI0002964AC3	UniProt:M0YM80	MapMan:27.3.3	:

Description

No Description!

Coordinates

chrchr3H:-:517132209..517134305

Molecular Weight (calculated)

28395.5 Da

IEP (calculated)

4.654

GRAVY (calculated)

-0.298

Length

260 amino acids

Sequence
(BLAST)

001: MDNCTDHNIA QRSIGFFRVP GLFVTLSSKG LNAVDPDSVW SPTSPLDFKN LSSNTVGTNL KPTGLLGIDA DLLKLRTGSP RVGLGLVDAL TADESSLHFE
101: GKNLFLESIR PFLELGLPKV AADAPSCQKT DSVGPGDFVH CDCEDEEYTC VIQHGANPRT THILRGQTVE VPKGVPSRRP IFTIEPIEER SWPSMPADGA
201: ASGSCSFCRK RLRDDMDTFM YLGEKAFCSD ECRTFCVEEE IDEVKLVKPD DSGGSANLHW

Best Arabidopsis Sequence Match ( AT3G22550.1 )
(BLAST)

001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK

Arabidopsis Description

NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.