CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 7
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043612_P002	Maize	plastid	58.17	60.24
Os01t0719000-01	Rice	cytosol	42.21	42.37
TraesCS3D01G288800.1	Wheat	cytosol	42.97	42.01
TraesCS3B01G323700.2	Wheat	cytosol	42.21	41.11
TraesCS3A01G289000.1	Wheat	cytosol	41.83	40.59
HORVU3Hr1G068120.1	Barley	cytosol	39.54	40.0
EES00998	Sorghum	cytosol, plastid	30.42	29.52
EER91113	Sorghum	mitochondrion	25.48	21.34
CDX69754	Canola	nucleus, plastid	22.05	21.09
Bra023326.1-P	Field mustard	plastid	18.25	21.05
CDY11512	Canola	nucleus	23.95	21.0
Bra007780.1-P	Field mustard	nucleus	23.57	20.95
CDX85711	Canola	plastid	17.87	20.8
CDX76742	Canola	nucleus	23.19	20.33
Bra000551.1-P	Field mustard	cytosol, mitochondrion	19.01	19.61
Bra008960.1-P	Field mustard	nucleus, plastid	20.15	19.27
AT2G25690.1	Thale cress	cytosol	23.57	19.14
CDX97112	Canola	nucleus, plastid	19.77	18.98
CDY38508	Canola	cytosol	21.67	18.33
CDX83224	Canola	cytosol	22.05	17.79
AT5G11460.1	Thale cress	cytosol, plastid	23.19	17.73
EES00181	Sorghum	cytosol, extracellular, nucleus	19.01	17.61
EER94230	Sorghum	cytosol, endoplasmic reticulum, nucleus	18.63	17.44
PGSC0003DMT400037607	Potato	nucleus	25.86	17.3
OQU77551	Sorghum	mitochondrion, plastid	23.95	16.98
Solyc08g067970.2.1	Tomato	nucleus	25.48	16.5
KRH52543	Soybean	nucleus	25.48	15.88
VIT_04s0008g04490.t01	Wine grape	nucleus	24.33	15.57
KRH61879	Soybean	extracellular	25.1	14.9
KRH05019	Soybean	nucleus	22.43	14.79
KRH09840	Soybean	plastid	21.29	14.11
KRH16080	Soybean	nucleus	21.29	13.79
KRH23481	Soybean	plastid	20.15	13.32
GSMUA_Achr7P09810_001	Banana	mitochondrion	20.53	13.01
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	14.83	11.71

Protein Annotations

EnsemblPlants:EES01375	EnsemblPlantsGene:SORBI_3003G278400	EntrezGene:8069803	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059
PANTHER:PTHR33059:SF13	PFAM:PF04570	PFscan:PS51795	ProteinID:EES01375	ProteinID:EES01375.1	RefSeq:XP_002456255.1
SEG:seg	UniParc:UPI0001A8483D	UniProt:C5XIC2	MapMan:27.3.3	:	:

Description

hypothetical protein

Coordinates

chr3:+:61437251..61439568

Molecular Weight (calculated)

27641.6 Da

IEP (calculated)

5.158

GRAVY (calculated)

-0.079

Length

263 amino acids

Sequence
(BLAST)

001: MVESSGHRSA TAPTAVGFFR VPGLFVRLSS SKGGGVSNAV DADSVWSPTS PLDLKNHLRS SPPRVGLGLV DALTADDETG CSMHFGGRSS FLDSIKPFLD
101: LALPKAAAAP VCGNKAAAAA PASSAGGVAA RVDEVNEYPY ADCEEYTCVI SRGANPRTTH FLAGETVEAV RRGGDVGGRC REVIFSIEPF SDQLLPSTSS
201: SSAAATASVA SGRCCCCMKR LQENKDIFIY LGEKAFCSSE CRKGYIEEAD EEVMMILDPA RNL

Best Arabidopsis Sequence Match ( AT5G11460.1 )
(BLAST)

001: MSQHSNYQMT TASDYYSTKP VLSAIRSHKL ISSVFEGKCP SDYESAWSPT SPLDFRLFST LGNPFAASSS RSIWRGKQRS WDSGKVGLSI VHSLVDDHHT
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG

Arabidopsis Description

At5g11460 [Source:UniProtKB/TrEMBL;Acc:Q9LYE4]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.