Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P13270_001 | Banana | nucleus | 35.18 | 40.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.64 | 35.14 |
| VIT_04s0008g04490.t01 | Wine grape | nucleus | 33.73 | 34.06 |
| GSMUA_Achr3P25470_001 | Banana | mitochondrion | 18.07 | 31.78 |
| Solyc08g067970.2.1 | Tomato | nucleus | 29.88 | 30.54 |
| CDX69754 | Canola | nucleus, plastid | 19.76 | 29.82 |
| HORVU3Hr1G051540.1 | Barley | cytosol | 19.52 | 29.67 |
| PGSC0003DMT400037607 | Potato | nucleus | 27.95 | 29.52 |
| Bra008960.1-P | Field mustard | nucleus, plastid | 19.52 | 29.45 |
| TraesCS3D01G215200.1 | Wheat | nucleus | 19.28 | 29.3 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 23.37 | 29.13 |
| TraesCS3A01G212800.1 | Wheat | nucleus | 19.04 | 29.04 |
| EES00998 | Sorghum | cytosol, plastid | 18.55 | 28.41 |
| GSMUA_Achr1P14130_001 | Banana | mitochondrion | 19.52 | 28.32 |
| Os01t0593200-01 | Rice | nucleus | 17.59 | 28.08 |
| Bra000551.1-P | Field mustard | cytosol, mitochondrion | 17.11 | 27.84 |
| GSMUA_Achr9P25720_001 | Banana | nucleus | 21.93 | 27.74 |
| GSMUA_Achr2P08850_001 | Banana | plastid | 19.76 | 27.52 |
| CDX97112 | Canola | nucleus, plastid | 18.07 | 27.37 |
| KRH05019 | Soybean | nucleus | 26.27 | 27.32 |
| TraesCS3B01G243000.2 | Wheat | nucleus | 20.24 | 26.67 |
| KRH61879 | Soybean | extracellular | 28.43 | 26.64 |
| GSMUA_Achr8P20380_001 | Banana | mitochondrion, nucleus | 18.07 | 26.6 |
| KRH52543 | Soybean | nucleus | 26.75 | 26.3 |
| CDX85711 | Canola | plastid | 14.22 | 26.11 |
| CDX83224 | Canola | cytosol | 20.48 | 26.07 |
| Os01t0719000-01 | Rice | cytosol | 16.39 | 25.95 |
| CDY11512 | Canola | nucleus | 18.55 | 25.67 |
| CDY38508 | Canola | cytosol | 19.04 | 25.4 |
| Zm00001d044365_P001 | Maize | cytosol | 15.9 | 25.0 |
| Bra007780.1-P | Field mustard | nucleus | 17.83 | 25.0 |
| KRH09840 | Soybean | plastid | 23.86 | 24.94 |
| GSMUA_Achr6P22030_001 | Banana | cytosol | 18.07 | 24.83 |
| CDX76742 | Canola | nucleus | 17.83 | 24.67 |
| TraesCS3D01G288800.1 | Wheat | cytosol | 15.66 | 24.16 |
| KRH16080 | Soybean | nucleus | 23.61 | 24.14 |
| TraesCS3B01G323700.2 | Wheat | cytosol | 15.66 | 24.07 |
| Bra023326.1-P | Field mustard | plastid | 13.01 | 23.68 |
| TraesCS3A01G289000.1 | Wheat | cytosol | 15.42 | 23.62 |
| KRH23481 | Soybean | plastid | 22.41 | 23.37 |
| AT2G25690.1 | Thale cress | cytosol | 18.07 | 23.15 |
| HORVU3Hr1G068120.1 | Barley | cytosol | 14.22 | 22.69 |
| GSMUA_Achr4P22610_001 | Banana | nucleus | 20.48 | 22.61 |
| AT5G11460.1 | Thale cress | cytosol, plastid | 17.59 | 21.22 |
| EES01375 | Sorghum | plastid | 13.01 | 20.53 |
| GSMUA_Achr4P21250_001 | Banana | nucleus | 17.83 | 20.16 |
| Zm00001d043612_P002 | Maize | plastid | 12.29 | 20.08 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P09810_001 | EnsemblPlants:GSMUA_Achr7T09810_001 | EnsemblPlantsGene:GSMUA_Achr7G09810_001 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 |
| PANTHER:PTHR33059:SF15 | PFscan:PS51257 | PFscan:PS51795 | UniParc:UPI00029528AD | UniProt:M0TG69 | MapMan:35.1 |
Description
Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G09810_001]
Coordinates
chr7:+:7992004..7993714
Molecular Weight (calculated)
45425.1 Da
IEP (calculated)
7.430
GRAVY (calculated)
-0.339
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRKRSRPIQ KDQSKGFLMS HPASGSCFPS DGVAKRTSCA SFLNVHGHLV GFSNKKGLSE SATVWGHTSP LDKVLSSITR STTGIIDGRL RCWDSSRVGL
101: GLVDTLNDEA KPCVKVLGSS ESRNIVFGSQ MRLNFSTPKS HQVGPRDDPL GAAPQIGSSK PRSVCSEMAI ELKGSKLVHE EYGLLRSCSV DTGGFSLLLT
201: KSIGNNCKSN SEVLRSESMD ILDSPPLAKE DTNFDKISVS LPISFGSSHR FIGSLSASEI EQSEDYTCII SHGPNPRMTH IFGDCILESH SIESPKIKNK
301: HRKEDEGSTW LSEPSEEMLS CFLNDSLSFC FSCRTKVDDD GKDICMHRGK KALCGCECCR NGTLLEEKEK TRIISSGSPG SSFHEETFLD RKHCLLMDVI
401: DLSFYLAVNK TLLAI
101: GLVDTLNDEA KPCVKVLGSS ESRNIVFGSQ MRLNFSTPKS HQVGPRDDPL GAAPQIGSSK PRSVCSEMAI ELKGSKLVHE EYGLLRSCSV DTGGFSLLLT
201: KSIGNNCKSN SEVLRSESMD ILDSPPLAKE DTNFDKISVS LPISFGSSHR FIGSLSASEI EQSEDYTCII SHGPNPRMTH IFGDCILESH SIESPKIKNK
301: HRKEDEGSTW LSEPSEEMLS CFLNDSLSFC FSCRTKVDDD GKDICMHRGK KALCGCECCR NGTLLEEKEK TRIISSGSPG SSFHEETFLD RKHCLLMDVI
401: DLSFYLAVNK TLLAI
001: MSQHSNYQMT TASDYYSTKP VLSAIRSHKL ISSVFEGKCP SDYESAWSPT SPLDFRLFST LGNPFAASSS RSIWRGKQRS WDSGKVGLSI VHSLVDDHHT
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG
Arabidopsis Description
At5g11460 [Source:UniProtKB/TrEMBL;Acc:Q9LYE4]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.