Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000551.1-P | Field mustard | cytosol, mitochondrion | 66.56 | 85.1 |
| CDY38508 | Canola | cytosol | 71.78 | 75.24 |
| AT2G25690.1 | Thale cress | cytosol | 59.2 | 59.57 |
| CDY11512 | Canola | nucleus | 48.77 | 53.0 |
| CDX76742 | Canola | nucleus | 48.16 | 52.33 |
| CDX69754 | Canola | nucleus, plastid | 26.99 | 32.0 |
| CDX97112 | Canola | nucleus, plastid | 26.69 | 31.75 |
| CDX98213 | Canola | mitochondrion | 25.15 | 31.3 |
| CDX85711 | Canola | plastid | 21.47 | 30.97 |
| CDX92948 | Canola | mitochondrion | 24.85 | 30.68 |
| CDY34246 | Canola | mitochondrion | 24.54 | 30.53 |
| CDY24316 | Canola | mitochondrion, plastid | 20.25 | 30.28 |
| CDY65610 | Canola | mitochondrion, nucleus | 24.54 | 29.85 |
| Os01t0180400-01 | Rice | cytosol | 17.18 | 29.79 |
| CDX93919 | Canola | nucleus | 21.17 | 28.87 |
| Os01t0593200-01 | Rice | nucleus | 22.7 | 28.46 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.06 | 28.0 |
| VIT_04s0008g04490.t01 | Wine grape | nucleus | 34.36 | 27.25 |
| TraesCS3D01G215200.1 | Wheat | nucleus | 22.7 | 27.11 |
| HORVU3Hr1G051540.1 | Barley | cytosol | 22.7 | 27.11 |
| Os01t0719000-01 | Rice | cytosol | 21.78 | 27.1 |
| Solyc08g067970.2.1 | Tomato | nucleus | 33.74 | 27.09 |
| PGSC0003DMT400037607 | Potato | nucleus | 32.52 | 26.97 |
| CDY56452 | Canola | plastid | 19.33 | 26.69 |
| EES00998 | Sorghum | cytosol, plastid | 22.09 | 26.57 |
| CDX76690 | Canola | plastid | 19.02 | 26.5 |
| Zm00001d044365_P001 | Maize | cytosol | 21.17 | 26.14 |
| TraesCS3A01G212800.1 | Wheat | nucleus | 21.78 | 26.1 |
| KRH05019 | Soybean | nucleus | 31.6 | 25.81 |
| TraesCS3B01G137000.1 | Wheat | cytosol | 27.3 | 25.28 |
| TraesCS3D01G119500.1 | Wheat | cytosol | 27.61 | 25.21 |
| GSMUA_Achr7P13270_001 | Banana | nucleus | 27.61 | 24.66 |
| TraesCS3A01G117700.1 | Wheat | cytosol | 26.69 | 24.65 |
| KRH52543 | Soybean | nucleus | 30.98 | 23.93 |
| CDX67936 | Canola | nucleus, plastid | 18.71 | 23.92 |
| TraesCS3B01G243000.2 | Wheat | nucleus | 23.01 | 23.81 |
| KRH61879 | Soybean | extracellular | 32.21 | 23.7 |
| HORVU3Hr1G068120.1 | Barley | cytosol | 18.71 | 23.46 |
| Zm00001d008782_P001 | Maize | nucleus | 25.15 | 23.23 |
| KRH16080 | Soybean | nucleus | 28.83 | 23.15 |
| Os05t0180500-01 | Rice | cytosol | 23.01 | 22.94 |
| Zm00001d039597_P001 | Maize | cytosol | 24.85 | 22.82 |
| CDX79402 | Canola | nucleus, plastid | 19.33 | 22.66 |
| TraesCS3B01G323700.2 | Wheat | cytosol | 18.71 | 22.59 |
| EES00181 | Sorghum | cytosol, extracellular, nucleus | 19.63 | 22.54 |
| Zm00001d043612_P002 | Maize | plastid | 17.48 | 22.44 |
| OQU77551 | Sorghum | mitochondrion, plastid | 25.46 | 22.37 |
| TraesCS3D01G288800.1 | Wheat | cytosol | 18.4 | 22.3 |
| TraesCS3A01G289000.1 | Wheat | cytosol | 18.4 | 22.14 |
| EES01375 | Sorghum | plastid | 17.79 | 22.05 |
| GSMUA_Achr7P09810_001 | Banana | mitochondrion | 26.07 | 20.48 |
| Zm00001d037713_P001 | Maize | cytosol | 20.55 | 20.43 |
| TraesCS1B01G139200.1 | Wheat | plastid | 22.39 | 19.95 |
| CDY53722 | Canola | extracellular, vacuole | 22.39 | 19.95 |
| HORVU1Hr1G026780.1 | Barley | cytosol, extracellular, plastid | 20.55 | 18.66 |
| TraesCS1A01G119800.1 | Wheat | plastid | 21.47 | 17.72 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 18.1 | 17.72 |
| TraesCS1D01G120700.1 | Wheat | cytosol, extracellular, plastid | 21.17 | 17.47 |
| HORVU3Hr1G021650.1 | Barley | nucleus | 23.01 | 17.05 |
Protein Annotations
| EnsemblPlants:CDX83224 | EnsemblPlantsGene:GSBRNA2T00138771001 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF15 |
| PFAM:PF04570 | PFscan:PS51795 | ProteinID:CDX83224 | ProteinID:CDX83224.1 | SEG:seg | UniParc:UPI0004EF0963 |
| MapMan:27.3.3 | : | : | : | : | : |
Description
BnaA03g22820D
Coordinates
chrLK031832:+:521958..524356
Molecular Weight (calculated)
36683.6 Da
IEP (calculated)
4.777
GRAVY (calculated)
-0.425
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKTRTRFHQ QDETMSQSVD PQTDLVGHNN TKAITNPLTL SLLIGLNNNK CISDSDILRS PKSPLEFRVL SKMAEPFFLR SPRSSLTAHL NCCCVPAKVG
101: LSIVDSLGDD GVLSPDVVFG PALRLKFSEI KDKHPSLFPE TKSLDVEKKR SGVIFEIGDE TEPIGLTNRS FSEDDCPRKA RVLSQSKAIA EEYFPGIGSD
201: STASSSCLSE DDMEMSEDYT CIIAHGPNPK TTHIYGDRVL ECQKNEVINK EKQFERELES MFPVDHFLSV CNFCNKKLEV GYDIYMYRGE KAFCSEECRS
301: EEMMMIDEEG LEDSCLTMHE SLKKLF
101: LSIVDSLGDD GVLSPDVVFG PALRLKFSEI KDKHPSLFPE TKSLDVEKKR SGVIFEIGDE TEPIGLTNRS FSEDDCPRKA RVLSQSKAIA EEYFPGIGSD
201: STASSSCLSE DDMEMSEDYT CIIAHGPNPK TTHIYGDRVL ECQKNEVINK EKQFERELES MFPVDHFLSV CNFCNKKLEV GYDIYMYRGE KAFCSEECRS
301: EEMMMIDEEG LEDSCLTMHE SLKKLF
001: MLKTRAMFPH KDQAMSLSLD PQSDLVVGHT NNRPITNPLA LSLLIGLNNK NKCISDSDFV RSPKSPLEFR VLSTMADSFF LRSPRSSLTA HLNCCCGPAA
101: KVGLSIVDSL GDDRCLLPDI VFGPALRIKC SEVMDKHPKL LFPVANKSKK IENERSGVVF EIGDNSSETE PVGLRNRSFS ANDCLRKTRV LSRSKLGQEG
201: DFPGSGSDNA FSSEDDMEDY TCIIAHGPNP KTTHIYGDRV LECHKNELKG DEDNKEKFGS VFPSDNFLGI CNFCNKKLGG GDDIYMYREK SFCSEECRSE
301: EMMIDEEDLE EPCIDMHESL KKLF
101: KVGLSIVDSL GDDRCLLPDI VFGPALRIKC SEVMDKHPKL LFPVANKSKK IENERSGVVF EIGDNSSETE PVGLRNRSFS ANDCLRKTRV LSRSKLGQEG
201: DFPGSGSDNA FSSEDDMEDY TCIIAHGPNP KTTHIYGDRV LECHKNELKG DEDNKEKFGS VFPSDNFLGI CNFCNKKLGG GDDIYMYREK SFCSEECRSE
301: EMMIDEEDLE EPCIDMHESL KKLF
Arabidopsis Description
At2g25690 [Source:UniProtKB/TrEMBL;Acc:Q9SL94]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.