CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001873.1-P	Field mustard	mitochondrion	98.48	98.48
CDY65610	Canola	mitochondrion, nucleus	80.68	79.48
CDX98213	Canola	mitochondrion	77.65	78.24
CDY34246	Canola	mitochondrion	76.89	77.48
CDY24316	Canola	mitochondrion, plastid	60.61	73.39
AT3G22550.1	Thale cress	mitochondrion	73.11	72.28
GSMUA_Achr3P25470_001	Banana	mitochondrion	34.09	38.14
GSMUA_Achr1P14130_001	Banana	mitochondrion	37.5	34.62
CDX93919	Canola	nucleus	30.3	33.47
GSMUA_Achr8P20380_001	Banana	mitochondrion, nucleus	34.85	32.62
Os03t0665200-01	Rice	nucleus	36.74	32.12
CDX76690	Canola	plastid	28.41	32.05
GSMUA_Achr2P08850_001	Banana	plastid	35.98	31.88
CDY56452	Canola	plastid	28.41	31.78
TraesCS4D01G016600.1	Wheat	mitochondrion	33.33	31.43
GSMUA_Achr9P25720_001	Banana	nucleus	38.26	30.79
EER91113	Sorghum	mitochondrion	35.23	29.62
TraesCS4A01G295300.1	Wheat	plastid	33.33	29.43
TraesCS4B01G018400.1	Wheat	plastid	33.71	29.28
Zm00001d013595_P001	Maize	mitochondrion	32.95	27.02
CDX69754	Canola	nucleus, plastid	27.65	26.55
CDX76742	Canola	nucleus	29.92	26.33
CDY11512	Canola	nucleus	29.55	26.0
CDX97112	Canola	nucleus, plastid	26.14	25.18
GSMUA_Achr6P22030_001	Banana	cytosol	28.79	25.17
CDX83224	Canola	cytosol	30.68	24.85
GSMUA_Achr4P22610_001	Banana	nucleus	35.23	24.73
CDX85711	Canola	plastid	20.83	24.34
CDY38508	Canola	cytosol	28.03	23.79
EER94230	Sorghum	cytosol, endoplasmic reticulum, nucleus	25.0	23.49
GSMUA_Achr4P21250_001	Banana	nucleus	32.58	23.43
Zm00001d032937_P001	Maize	cytosol	25.0	23.4
CDY53722	Canola	extracellular, vacuole	29.92	21.58
Os10t0422600-01	Rice	endoplasmic reticulum	28.03	21.45
CDX67936	Canola	nucleus, plastid	20.08	20.78
CDX79402	Canola	nucleus, plastid	20.83	19.78
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	27.65	16.7
HORVU3Hr1G018540.1	Barley	extracellular	4.17	8.46

Protein Annotations

EnsemblPlants:CDX92948	EnsemblPlantsGene:GSBRNA2T00154816001	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF26
PFAM:PF04570	PFscan:PS51795	ProteinID:CDX92948	ProteinID:CDX92948.1	SEG:seg	UniParc:UPI0004EDE01E
MapMan:27.3.3	:	:	:	:	:

Description

BnaA03g36700D

Coordinates

chrLK031874:-:232644..234190

Molecular Weight (calculated)

29566.1 Da

IEP (calculated)

8.394

GRAVY (calculated)

-0.545

Length

264 amino acids

Sequence
(BLAST)

001: MLKKRSRSMQ TLMANTNQKQ SKTTPFPRLF TAFTSFKSFT ENDAVASPTS ILDTKPFSVL KNPFGPDSPK THEPEIRLKL EPKRIGLALV DTLIKEEPGL
101: SRPRSSSILF GSQIRIRVPD YPRSSADFGT KTKNSPTSPP PEETKISVPG SGLGSARIFT GYFSTSDMEL SEDYTCVTCH GPNPRTIHIF DNCIVESKPG
201: VVFFRRSDPV HESYHLPPDS FLSTCCNCKK NLGPRDDIFI YRGDRAFCSS ECRSLEMMSE ENDF

Best Arabidopsis Sequence Match ( AT3G22550.1 )
(BLAST)

001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK

Arabidopsis Description

NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.