Factsheet for Zm00001d013595_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005064_P002
Zm00001d005094_P001
Zm00001d005108_P003
Zm00001d006805_P001
Zm00001d010811_P002
Zm00001d028871_P001
Zm00001d038745_P002
Zm00001d044606_P001
Zm00001d051459_P001
Zm00001d053677_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63210.1	Zm00001d051459_P001	AT2G31985.1	21798944
AT3G63210.1	Zm00001d005094_P001	AT2G38270.1	21798944
AT3G63210.1	Zm00001d044606_P001	AT2G38270.1	21798944
AT3G63210.1	Zm00001d005064_P002	AT3G08850.1	21798944
AT3G63210.1	Zm00001d005108_P003	AT3G29160.1	21798944
AT3G63210.1	Zm00001d010811_P002	AT3G29160.1	21798944
AT3G63210.1	Zm00001d038745_P002	AT3G29160.1	21798944
AT3G63210.1	Zm00001d006805_P001	AT5G11980.1	21798944
AT3G63210.1	Zm00001d028871_P001	AT5G11980.1	21798944
AT3G63210.1	Zm00001d053677_P001	AT5G11980.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91113	Sorghum	mitochondrion	71.74	73.57
Os03t0665200-01	Rice	nucleus	64.91	69.21
TraesCS4D01G016600.1	Wheat	mitochondrion	56.52	65.0
TraesCS4A01G295300.1	Wheat	plastid	56.21	60.54
TraesCS4B01G018400.1	Wheat	plastid	55.28	58.55
VIT_07s0151g00800.t01	Wine grape	mitochondrion, nucleus	34.16	37.54
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	50.31	37.07
Bra007736.1-P	Field mustard	plastid	25.78	35.62
KRH35505	Soybean	nucleus, plastid	29.19	35.34
KRG91310	Soybean	nucleus, plastid	29.5	35.32
KRH32034	Soybean	mitochondrion	29.5	35.19
Solyc09g082210.2.1	Tomato	cytosol, plastid	31.68	34.69
KRH71405	Soybean	mitochondrion, nucleus	27.64	33.84
PGSC0003DMT400082082	Potato	nucleus, plastid	31.68	33.77
KRH27651	Soybean	plastid	27.02	33.59
Bra023820.1-P	Field mustard	mitochondrion	27.33	33.59
VIT_05s0020g03670.t01	Wine grape	nucleus, plastid	30.43	33.56
CDY56452	Canola	plastid	24.53	33.47
CDX93919	Canola	nucleus	24.53	33.05
CDX92948	Canola	mitochondrion	27.02	32.95
CDX76690	Canola	plastid	23.91	32.91
Bra001873.1-P	Field mustard	mitochondrion	26.71	32.58
KRH67235	Soybean	mitochondrion, nucleus	28.57	32.51
CDY65610	Canola	mitochondrion, nucleus	27.02	32.46
CDX98213	Canola	mitochondrion	26.4	32.44
CDY34246	Canola	mitochondrion	26.4	32.44
AT3G22550.1	Thale cress	mitochondrion	26.4	31.84
KRH77839	Soybean	plastid	25.78	31.8
Bra039962.1-P	Field mustard	mitochondrion, nucleus	26.4	31.72
CDY24316	Canola	mitochondrion, plastid	20.81	30.73
Solyc09g065390.1.1	Tomato	mitochondrion	17.39	30.43
AT3G63210.1	Thale cress	mitochondrion, plastid	24.84	30.42
KRG95554	Soybean	mitochondrion, nucleus	26.71	30.39
GSMUA_Achr4P22610_001	Banana	nucleus	34.78	29.79
GSMUA_Achr4P21250_001	Banana	nucleus	31.99	28.07
Zm00001d043612_P002	Maize	plastid	21.43	27.17
Zm00001d032937_P001	Maize	cytosol	23.6	26.95
Zm00001d008782_P001	Maize	nucleus	29.5	26.91
Zm00001d044365_P001	Maize	cytosol	20.19	24.62
Zm00001d039597_P001	Maize	cytosol	26.4	23.94
CDY53722	Canola	extracellular, vacuole	26.71	23.5
AT1G79970.1	Thale cress	nucleus, plastid	16.77	22.5
CDX67936	Canola	nucleus, plastid	17.08	21.57
Bra040437.1-P	Field mustard	mitochondrion, plastid	26.4	21.3
Zm00001d037713_P001	Maize	cytosol	21.43	21.04
Bra003541.1-P	Field mustard	nucleus, plastid	17.7	20.5
CDX79402	Canola	nucleus, plastid	17.39	20.14
PGSC0003DMT400037957	Potato	plastid	15.53	17.06
Solyc06g009000.1.1	Tomato	plastid	15.22	17.01

Protein Annotations

EnsemblPlants:Zm00001d013595_P001	EnsemblPlants:Zm00001d013595_T001	EnsemblPlantsGene:Zm00001d013595	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059
PANTHER:PTHR33059:SF65	PFAM:PF04570	PFscan:PS51795	ProteinID:AQK63921.1	SEG:seg	UniParc:UPI000221E95D
UniProt:A0A1D6GKR2	MapMan:27.3.3	:	:	:	:

Description

Protein MARD1

Coordinates

chr5:+:15089495..15092531

Molecular Weight (calculated)

32880.0 Da

IEP (calculated)

7.873

GRAVY (calculated)

-0.066

Length

322 amino acids

Sequence
(BLAST)

001: MLRNRSRRAV GGGANQAQGR AGGLMAELPA AAAAQSPRHP SSSSSSSPAA APVFPSPRPF VAMAALPQAG LLPDGSSEGP RSAVSPTSIL ETKHFCCSPL
101: PPFLSERSLR RAARVDAAAA AEPAGVGLAD VLRDHGDAKV AGGKVVLGSQ LRVQVPSGRA VELLSSPIEF GAKNRDAQLA ALSPARRLLP EVVSSPSARV
201: FAAGGVAVVP PGEMAMSEDY TCVISRGPNP RTTHIFDDCI VESCGDLLAD KPAAGGAAAA ACGFFSSCHA CNKQLGHGND ILIYRGHKAF CSSECRYQET
301: LLDEAVDGEF ALGDGGKGGG RC

Best Arabidopsis Sequence Match ( AT3G22550.1 )
(BLAST)

001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK

Arabidopsis Description

NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.