CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71405	Soybean	mitochondrion, nucleus	65.93	67.68
KRH67235	Soybean	mitochondrion, nucleus	56.3	53.71
KRG95554	Soybean	mitochondrion, nucleus	55.56	53.0
GSMUA_Achr3P25470_001	Banana	mitochondrion	34.44	39.41
VIT_07s0151g00800.t01	Wine grape	mitochondrion, nucleus	41.48	38.23
KRH35505	Soybean	nucleus, plastid	36.67	37.22
KRH27651	Soybean	plastid	35.56	37.07
KRG91310	Soybean	nucleus, plastid	35.93	36.06
KRH77839	Soybean	plastid	34.07	35.25
GSMUA_Achr1P14130_001	Banana	mitochondrion	36.3	34.27
GSMUA_Achr9P25720_001	Banana	nucleus	39.26	32.32
GSMUA_Achr8P20380_001	Banana	mitochondrion, nucleus	32.96	31.56
Solyc09g065390.1.1	Tomato	mitochondrion	21.11	30.98
Os03t0665200-01	Rice	nucleus	34.07	30.46
Zm00001d013595_P001	Maize	mitochondrion	35.19	29.5
EER91113	Sorghum	mitochondrion	34.07	29.3
GSMUA_Achr2P08850_001	Banana	plastid	31.48	28.52
TraesCS4D01G016600.1	Wheat	mitochondrion	28.89	27.86
Zm00001d032937_P001	Maize	cytosol	27.78	26.6
TraesCS4A01G295300.1	Wheat	plastid	29.26	26.42
GSMUA_Achr4P22610_001	Banana	nucleus	35.56	25.53
GSMUA_Achr4P21250_001	Banana	nucleus	34.44	25.34
TraesCS4B01G018400.1	Wheat	plastid	28.52	25.33
EER94230	Sorghum	cytosol, endoplasmic reticulum, nucleus	26.3	25.27
GSMUA_Achr6P22030_001	Banana	cytosol	27.78	24.83
Os10t0422600-01	Rice	endoplasmic reticulum	30.74	24.06
KRH52543	Soybean	nucleus	34.07	21.8
KRH05019	Soybean	nucleus	31.48	21.3
KRH23481	Soybean	plastid	30.0	20.35
KRH09840	Soybean	plastid	29.26	19.9
KRH16080	Soybean	nucleus	29.26	19.46
KRH61879	Soybean	extracellular	31.85	19.41
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	22.59	13.96
HORVU3Hr1G018540.1	Barley	extracellular	4.81	10.0

Protein Annotations

EMBL:ACUP02006093	EnsemblPlants:KRH32034	EnsemblPlantsGene:GLYMA_10G027900	EntrezGene:100811607	InterPro:IPR007650	InterPro:Zf-FLZ_dom
PANTHER:PTHR33059	PANTHER:PTHR33059:SF11	PFAM:PF04570	PFscan:PS51795	ProteinID:KRH32034	ProteinID:KRH32034.1
SEG:seg	UniParc:UPI000233CDDC	UniProt:I1L852	MapMan:27.3.3	:	:

Description

hypothetical protein

Coordinates

chr10:-:2430561..2432427

Molecular Weight (calculated)

29412.9 Da

IEP (calculated)

8.167

GRAVY (calculated)

-0.345

Length

270 amino acids

Sequence
(BLAST)

001: MLLRNRSRAV TKPSLMGDHS SSQPCPNQSY KRTIIPSLFS PKFRDFTAKC LSAGAEALRS PTSILDTRAL SSPFGSPLSH EAAASENTTS WDSKCIGLAL
101: VGALKDETFP QNSTKPSSGT VLFGTKHRVK IPPLPLSLPP PSFESKTCAS AAAADCAAKT KDSPLSVATG VLSLSEMELS EEYTCVIAHG PNPRTTHIFD
201: NCIVESYCSL PNTPNSPSLN FLSFCHTCKK HLEQTKDIFI YRGEKAFCSK ECRHQEMVLD GARNSEFDRY

Best Arabidopsis Sequence Match ( AT3G63210.1 )
(BLAST)

001: MLRNKPRAAV TTKKQTSLLM ADQPPPPKPN TCHCSPSLFS SPKFRFFTSK MMMTPFDSDF SLVSPTSILE ANPSIFSSKN PKPVSYFEPT IPNPQRFHSP
101: DVFGLADLVK DGDSNRDHSR KPVNKMVLFG SKLRVQIPSS ADFGTKTGIR YPPCQLSPCV QTKVLAVSEI DQTEDYTRVI SHGPNPTITH IFDNSVFVEA
201: TPCSVPLPQP AMETKSTESF LSRCFTCKKN LDQKQDIYIY RGEKGFCSSE CRYQEMLLDQ MET

Arabidopsis Description

MARD1Protein MARD1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGS1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.