Factsheet for VIT_07s0151g00800.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g03670.t01	Wine grape	nucleus, plastid	48.46	48.63
GSMUA_Achr3P25470_001	Banana	mitochondrion	35.15	43.64
KRH32034	Soybean	mitochondrion	38.23	41.48
KRH71405	Soybean	mitochondrion, nucleus	36.52	40.68
KRG95554	Soybean	mitochondrion, nucleus	39.25	40.64
GSMUA_Achr1P14130_001	Banana	mitochondrion	38.91	39.86
KRH67235	Soybean	mitochondrion, nucleus	38.23	39.58
GSMUA_Achr8P20380_001	Banana	mitochondrion, nucleus	35.84	37.23
GSMUA_Achr2P08850_001	Banana	plastid	37.2	36.58
TraesCS4D01G016600.1	Wheat	mitochondrion	34.47	36.07
Os03t0665200-01	Rice	nucleus	36.18	35.1
TraesCS4A01G295300.1	Wheat	plastid	35.49	34.78
GSMUA_Achr9P25720_001	Banana	nucleus	38.57	34.45
EER91113	Sorghum	mitochondrion	36.86	34.39
Zm00001d013595_P001	Maize	mitochondrion	37.54	34.16
Solyc09g065390.1.1	Tomato	mitochondrion	21.16	33.7
TraesCS4B01G018400.1	Wheat	plastid	32.42	31.25
GSMUA_Achr6P22030_001	Banana	cytosol	31.74	30.79
GSMUA_Achr4P22610_001	Banana	nucleus	37.88	29.52
GSMUA_Achr4P21250_001	Banana	nucleus	35.49	28.34
Zm00001d032937_P001	Maize	cytosol	24.91	25.89
EER94230	Sorghum	cytosol, endoplasmic reticulum, nucleus	22.53	23.49
Os10t0422600-01	Rice	endoplasmic reticulum	27.3	23.19
VIT_04s0008g04490.t01	Wine grape	nucleus	31.06	22.14
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	26.96	18.08
HORVU3Hr1G018540.1	Barley	extracellular	4.1	9.23

Protein Annotations

EntrezGene:100855273	wikigene:100855273	MapMan:27.3.3	ProteinID:CBI28710	ProteinID:CBI28710.3	UniProt:D7TDY7
EMBL:FN595764	InterPro:IPR007650	EntrezGene:LOC100855273	wikigene:LOC100855273	PFAM:PF04570	PFscan:PS51795
PANTHER:PTHR33059	PANTHER:PTHR33059:SF11	TIGR:TC61345	UniParc:UPI00019838D9	ArrayExpress:VIT_07s0151g00800	EnsemblPlantsGene:VIT_07s0151g00800
EnsemblPlants:VIT_07s0151g00800.t01	unigene:Vvi.7448	RefSeq:XP_003632307	RefSeq:XP_003632307.1	InterPro:Zf-FLZ_dom	SEG:seg

Description

No Description!

Coordinates

chr7:+:1072173..1074583

Molecular Weight (calculated)

32367.0 Da

IEP (calculated)

5.055

GRAVY (calculated)

-0.478

Length

293 amino acids

Sequence
(BLAST)

001: MLRNRSRAVA SKQAIMGDHS SLPSPTENLT KPISFLLGSP KIFRGFISKC LPEAEDIISP TSIFDTKPFS GNPFEYEKTQ ASPGTFSETK RSWENLDSIG
101: IGVALIDSDP INGEGANENF SKPNSRMVLF GSQLKVQIPH LQPSALSPAE SPKSPADFGI KTRNSQLASL SPFGSLNSGI QTKDSPRIFT GMELSEEYTC
201: VISHGPNPRT THIFDNCIVE SCCGVSALSQ NNYCTFPENP NSPPENFLSC CHTCKKNLSQ ERDIYIYRGE KAFCSHECRS QEMLFDEEED LEF

Best Arabidopsis Sequence Match ( AT3G22550.1 )
(BLAST)

001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK

Arabidopsis Description

NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.